RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 NISCHQ9Y2I1 1504 aa33.31■■■□□ 2.92
NOP56-220ENST00000616692 CCDC180Q9P1Z9 1646 aa30.14■■■□□ 2.42
NOP56-220ENST00000616692 ABCC9O60706 1549 aa29.96■■■□□ 2.39
NOP56-220ENST00000616692 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.18
NOP56-220ENST00000616692 NACADO15069 1562 aa28.52■■■□□ 2.16
NOP56-220ENST00000616692 DNAJC5BQ9UF47 199 aa28.21■■■□□ 2.11
NOP56-220ENST00000616692 MYO15BQ96JP2 1530 aa28.21■■■□□ 2.11
NOP56-220ENST00000616692 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
NOP56-220ENST00000616692 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
NOP56-220ENST00000616692 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
NOP56-220ENST00000616692 PABPN1Q86U42 306 aaKnown RBP eCLIP27.75■■■□□ 2.031e-6■■□□□ 13.3
NOP56-220ENST00000616692 PELP1Q8IZL8 1130 aaKnown RBP27.75■■■□□ 2.03
NOP56-220ENST00000616692 SHROOM4Q9ULL8 1493 aa27.74■■■□□ 2.03
NOP56-220ENST00000616692 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
NOP56-220ENST00000616692 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
NOP56-220ENST00000616692 MYT1Q01538 1121 aa27.36■■□□□ 1.97
NOP56-220ENST00000616692 CC2D2AQ9P2K1 1620 aa27.17■■□□□ 1.94
NOP56-220ENST00000616692 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
NOP56-220ENST00000616692 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
NOP56-220ENST00000616692 EIF4G1Q04637 1599 aaKnown RBP27.11■■□□□ 1.93
NOP56-220ENST00000616692 TTBK1Q5TCY1 1321 aaPredicted RBP26.39■■□□□ 1.82
NOP56-220ENST00000616692 NCAPD3P42695 1498 aa26.29■■□□□ 1.8
NOP56-220ENST00000616692 DNAJC5Q9H3Z4 198 aa26.26■■□□□ 1.79
NOP56-220ENST00000616692 CUX2O14529 1486 aa26.21■■□□□ 1.79
NOP56-220ENST00000616692 HMGXB3Q12766 1538 aa26.11■■□□□ 1.77
NOP56-220ENST00000616692 SMARCA2P51531 1590 aa26.1■■□□□ 1.77
NOP56-220ENST00000616692 ATAD2BQ9ULI0 1458 aa26.08■■□□□ 1.77
NOP56-220ENST00000616692 SMARCA4P51532 1647 aa26.01■■□□□ 1.75
NOP56-220ENST00000616692 ERCC6Q03468 1493 aa25.96■■□□□ 1.75
NOP56-220ENST00000616692 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
NOP56-220ENST00000616692 PEG3Q9GZU2 1588 aa25.91■■□□□ 1.74
NOP56-220ENST00000616692 BAZ1BQ9UIG0 1483 aaKnown RBP25.8■■□□□ 1.72
NOP56-220ENST00000616692 PRKCSHP14314 528 aaPredicted RBP25.79■■□□□ 1.72
NOP56-220ENST00000616692 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
NOP56-220ENST00000616692 NESP48681 1621 aa25.65■■□□□ 1.7
NOP56-220ENST00000616692 THOC2Q8NI27 1593 aaKnown RBP25.63■■□□□ 1.69
NOP56-220ENST00000616692 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
NOP56-220ENST00000616692 MROH2BQ7Z745 1585 aa25.54■■□□□ 1.68
NOP56-220ENST00000616692 HRCP23327 699 aa25.45■■□□□ 1.67
NOP56-220ENST00000616692 KIF21AQ7Z4S6 1674 aa25.41■■□□□ 1.66
NOP56-220ENST00000616692 CADPSQ9ULU8 1353 aa25.4■■□□□ 1.66
NOP56-220ENST00000616692 MRC2Q9UBG0 1479 aa25.32■■□□□ 1.64
NOP56-220ENST00000616692 WDR62O43379 1518 aa25.3■■□□□ 1.64
NOP56-220ENST00000616692 ERICH6Q7L0X2 663 aa25.25■■□□□ 1.63
NOP56-220ENST00000616692 APLP2Q06481 763 aa25.21■■□□□ 1.63
NOP56-220ENST00000616692 WIZO95785 1651 aa25.18■■□□□ 1.62
NOP56-220ENST00000616692 CEP164Q9UPV0 1460 aa25.14■■□□□ 1.62
NOP56-220ENST00000616692 SLC24A1O60721 1099 aa25.13■■□□□ 1.61
NOP56-220ENST00000616692 SCAF1Q9H7N4 1312 aaKnown RBP25.12■■□□□ 1.61
NOP56-220ENST00000616692 CFTRP13569 1480 aa25.1■■□□□ 1.61
NOP56-220ENST00000616692 BCL11AQ9H165 835 aa25.09■■□□□ 1.61
NOP56-220ENST00000616692 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
NOP56-220ENST00000616692 TOP2AP11388 1531 aaKnown RBP25.03■■□□□ 1.6
NOP56-220ENST00000616692 RSF1Q96T23 1441 aaPredicted RBP24.98■■□□□ 1.59
NOP56-220ENST00000616692 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
NOP56-220ENST00000616692 URB2Q14146 1524 aaKnown RBP24.85■■□□□ 1.57
NOP56-220ENST00000616692 OSCARQ8IYS5 282 aa24.81■■□□□ 1.56
NOP56-220ENST00000616692 FAM9AQ8IZU1 332 aaPredicted RBP24.76■■□□□ 1.55
NOP56-220ENST00000616692 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
NOP56-220ENST00000616692 IFT140Q96RY7 1462 aa24.72■■□□□ 1.55
NOP56-220ENST00000616692 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
NOP56-220ENST00000616692 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
NOP56-220ENST00000616692 PPARGC1BQ86YN6 1023 aaKnown RBP24.6■■□□□ 1.53
NOP56-220ENST00000616692 TOPBP1Q92547 1522 aa24.58■■□□□ 1.53
NOP56-220ENST00000616692 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
NOP56-220ENST00000616692 RIMBP3CA6NJZ7 1639 aa24.49■■□□□ 1.51
NOP56-220ENST00000616692 RIMBP3BA6NNM3 1639 aa24.49■■□□□ 1.51
NOP56-220ENST00000616692 RIMBP3Q9UFD9 1639 aa24.49■■□□□ 1.51
NOP56-220ENST00000616692 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
NOP56-220ENST00000616692 EIF4G3O43432 1585 aaKnown RBP24.44■■□□□ 1.5
NOP56-220ENST00000616692 TARBP1Q13395 1621 aaKnown RBP24.41■■□□□ 1.5
NOP56-220ENST00000616692 WDR97A6NE52 1622 aa24.4■■□□□ 1.5
NOP56-220ENST00000616692 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
NOP56-220ENST00000616692 POLA1P09884 1462 aaPredicted RBP24.28■■□□□ 1.48
NOP56-220ENST00000616692 CENPBP07199 599 aaPredicted RBP24.27■■□□□ 1.48
NOP56-220ENST00000616692 CHD1O14646 1710 aa24.26■■□□□ 1.47
NOP56-220ENST00000616692 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.472e-16■■■■□ 24.4
NOP56-220ENST00000616692 SOGA1O94964 1423 aa24.18■■□□□ 1.46
NOP56-220ENST00000616692 MAGI1Q96QZ7 1491 aaPredicted RBP24.14■■□□□ 1.45
NOP56-220ENST00000616692 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
NOP56-220ENST00000616692 DAXXQ9UER7 740 aaPredicted RBP24.12■■□□□ 1.45
NOP56-220ENST00000616692 CLASP1Q7Z460 1538 aa24.11■■□□□ 1.45
NOP56-220ENST00000616692 RAD54L2Q9Y4B4 1467 aa24.09■■□□□ 1.45
NOP56-220ENST00000616692 FGD5Q6ZNL6 1462 aa24.09■■□□□ 1.45
NOP56-220ENST00000616692 SYNJ1O43426 1573 aa24.08■■□□□ 1.44
NOP56-220ENST00000616692 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
NOP56-220ENST00000616692 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
NOP56-220ENST00000616692 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
NOP56-220ENST00000616692 CUX1P39880 1505 aa24.04■■□□□ 1.44
NOP56-220ENST00000616692 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
NOP56-220ENST00000616692 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
NOP56-220ENST00000616692 FBLN2P98095 1184 aa23.99■■□□□ 1.43
NOP56-220ENST00000616692 CHMP7Q8WUX9 453 aaPredicted RBP23.94■■□□□ 1.42
NOP56-220ENST00000616692 ACIN1Q9UKV3 1341 aaKnown RBP23.94■■□□□ 1.42
NOP56-220ENST00000616692 ABCA10Q8WWZ4 1543 aa23.92■■□□□ 1.42
NOP56-220ENST00000616692 PBRM1Q86U86 1689 aa23.9■■□□□ 1.42
NOP56-220ENST00000616692 GAPVD1Q14C86 1478 aa23.9■■□□□ 1.42
NOP56-220ENST00000616692 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
NOP56-220ENST00000616692 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
NOP56-220ENST00000616692 GTF3C3Q9Y5Q9 886 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms