RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 NISCHQ9Y2I1 1504 aa46.84■■■■■ 5.09
SIGMAR1-202ENST00000353468 CCDC180Q9P1Z9 1646 aa41.11■■■■■ 4.17
SIGMAR1-202ENST00000353468 ABCC9O60706 1549 aa39.39■■■■□ 3.9
SIGMAR1-202ENST00000353468 ZCCHC6Q5VYS8 1495 aaKnown RBP39.21■■■■□ 3.87
SIGMAR1-202ENST00000353468 DCAF8L2P0C7V8 631 aa38.87■■■■□ 3.81
SIGMAR1-202ENST00000353468 DCAF1Q9Y4B6 1507 aa38.75■■■■□ 3.79
SIGMAR1-202ENST00000353468 MYO15BQ96JP2 1530 aa38.53■■■■□ 3.76
SIGMAR1-202ENST00000353468 NACADO15069 1562 aa38.45■■■■□ 3.75
SIGMAR1-202ENST00000353468 RB1CC1Q8TDY2 1594 aa38.26■■■■□ 3.72
SIGMAR1-202ENST00000353468 SHROOM4Q9ULL8 1493 aa37.73■■■■□ 3.63
SIGMAR1-202ENST00000353468 SCRIBQ14160 1630 aa37.68■■■■□ 3.62
SIGMAR1-202ENST00000353468 UNC13AQ9UPW8 1703 aa37.41■■■■□ 3.58
SIGMAR1-202ENST00000353468 BICRAQ9NZM4 1560 aa37.09■■■■□ 3.53
SIGMAR1-202ENST00000353468 PABPN1Q86U42 306 aaKnown RBP eCLIP37.04■■■■□ 3.527e-7■■■■□ 25.6
SIGMAR1-202ENST00000353468 CECR2Q9BXF3 1484 aa36.42■■■■□ 3.42
SIGMAR1-202ENST00000353468 BAZ1AQ9NRL2 1556 aaPredicted RBP36.21■■■■□ 3.39
SIGMAR1-202ENST00000353468 MROH2BQ7Z745 1585 aa36.14■■■■□ 3.38
SIGMAR1-202ENST00000353468 SMARCA4P51532 1647 aa36.11■■■■□ 3.37
SIGMAR1-202ENST00000353468 RSF1Q96T23 1441 aaPredicted RBP36.1■■■■□ 3.37
SIGMAR1-202ENST00000353468 SUPT5HO00267 1087 aaKnown RBP36.05■■■■□ 3.36
SIGMAR1-202ENST00000353468 EIF4G1Q04637 1599 aaKnown RBP36.02■■■■□ 3.36
SIGMAR1-202ENST00000353468 WIZO95785 1651 aa35.8■■■■□ 3.32
SIGMAR1-202ENST00000353468 PEG3Q9GZU2 1588 aa35.72■■■■□ 3.31
SIGMAR1-202ENST00000353468 ATAD2BQ9ULI0 1458 aa35.69■■■■□ 3.3
SIGMAR1-202ENST00000353468 SMARCA2P51531 1590 aa35.66■■■■□ 3.3
SIGMAR1-202ENST00000353468 CC2D2AQ9P2K1 1620 aa35.64■■■■□ 3.3
SIGMAR1-202ENST00000353468 NCAPD3P42695 1498 aa35.5■■■■□ 3.27
SIGMAR1-202ENST00000353468 BAZ1BQ9UIG0 1483 aaKnown RBP35.44■■■■□ 3.26
SIGMAR1-202ENST00000353468 TOP2AP11388 1531 aaKnown RBP35.44■■■■□ 3.26
SIGMAR1-202ENST00000353468 HMGXB3Q12766 1538 aa35.38■■■■□ 3.25
SIGMAR1-202ENST00000353468 DNAJC5BQ9UF47 199 aa35.3■■■■□ 3.24
SIGMAR1-202ENST00000353468 CCDC88BA6NC98 1476 aa35.07■■■■□ 3.2
SIGMAR1-202ENST00000353468 CADPSQ9ULU8 1353 aa34.55■■■■□ 3.12
SIGMAR1-202ENST00000353468 CFTRP13569 1480 aa34.53■■■■□ 3.12
SIGMAR1-202ENST00000353468 LAMC3Q9Y6N6 1575 aa34.39■■■■□ 3.1
SIGMAR1-202ENST00000353468 NESP48681 1621 aa34.38■■■■□ 3.09
SIGMAR1-202ENST00000353468 PRDM2Q13029 1718 aa34.29■■■■□ 3.08
SIGMAR1-202ENST00000353468 CHIC1Q5VXU3 224 aa34.21■■■■□ 3.07
SIGMAR1-202ENST00000353468 PDS5BQ9NTI5 1447 aa34.15■■■■□ 3.06
SIGMAR1-202ENST00000353468 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
SIGMAR1-202ENST00000353468 ABCC8Q09428 1581 aa34.1■■■■□ 3.05
SIGMAR1-202ENST00000353468 WRNQ14191 1432 aaPredicted RBP eCLIP34.01■■■■□ 3.03
SIGMAR1-202ENST00000353468 CEP164Q9UPV0 1460 aa33.99■■■■□ 3.03
SIGMAR1-202ENST00000353468 TRIM41Q8WV44 630 aa33.97■■■■□ 3.03
SIGMAR1-202ENST00000353468 KIF21AQ7Z4S6 1674 aa33.95■■■■□ 3.03
SIGMAR1-202ENST00000353468 ERCC6Q03468 1493 aa33.85■■■■□ 3.01
SIGMAR1-202ENST00000353468 SYNJ1O43426 1573 aa33.84■■■■□ 3.01
SIGMAR1-202ENST00000353468 CUX1P39880 1505 aa33.83■■■■□ 3.01
SIGMAR1-202ENST00000353468 TOP2BQ02880 1626 aa33.78■■■■□ 3
SIGMAR1-202ENST00000353468 BIVM-ERCC5R4GMW8 1640 aa33.75■■■□□ 2.99
SIGMAR1-202ENST00000353468 URB2Q14146 1524 aaKnown RBP33.74■■■□□ 2.99
SIGMAR1-202ENST00000353468 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
SIGMAR1-202ENST00000353468 MRC2Q9UBG0 1479 aa33.72■■■□□ 2.99
SIGMAR1-202ENST00000353468 TOPBP1Q92547 1522 aa33.71■■■□□ 2.99
SIGMAR1-202ENST00000353468 THOC2Q8NI27 1593 aaKnown RBP33.57■■■□□ 2.96
SIGMAR1-202ENST00000353468 FGD5Q6ZNL6 1462 aa33.56■■■□□ 2.96
SIGMAR1-202ENST00000353468 WDR62O43379 1518 aa33.56■■■□□ 2.96
SIGMAR1-202ENST00000353468 POLA1P09884 1462 aaPredicted RBP33.49■■■□□ 2.95
SIGMAR1-202ENST00000353468 SOGA1O94964 1423 aa33.41■■■□□ 2.94
SIGMAR1-202ENST00000353468 RAD54L2Q9Y4B4 1467 aa33.37■■■□□ 2.93
SIGMAR1-202ENST00000353468 CUX2O14529 1486 aa33.32■■■□□ 2.92
SIGMAR1-202ENST00000353468 FAM9AQ8IZU1 332 aaPredicted RBP33.28■■■□□ 2.92
SIGMAR1-202ENST00000353468 ABCA10Q8WWZ4 1543 aa33.27■■■□□ 2.92
SIGMAR1-202ENST00000353468 RUSC2Q8N2Y8 1516 aa33.27■■■□□ 2.92
SIGMAR1-202ENST00000353468 TARBP1Q13395 1621 aaKnown RBP33.23■■■□□ 2.91
SIGMAR1-202ENST00000353468 IFT140Q96RY7 1462 aa33.23■■■□□ 2.91
SIGMAR1-202ENST00000353468 EEA1Q15075 1411 aa33.22■■■□□ 2.91
SIGMAR1-202ENST00000353468 KIF27Q86VH2 1401 aa33.21■■■□□ 2.91
SIGMAR1-202ENST00000353468 WDR97A6NE52 1622 aa33.17■■■□□ 2.9
SIGMAR1-202ENST00000353468 TDRD9Q8NDG6 1382 aaKnown RBP33.11■■■□□ 2.89
SIGMAR1-202ENST00000353468 CSRNP3Q8WYN3 585 aa33.11■■■□□ 2.89
SIGMAR1-202ENST00000353468 ZNF608Q9ULD9 1512 aaPredicted RBP33.03■■■□□ 2.88
SIGMAR1-202ENST00000353468 ABCA5Q8WWZ7 1642 aa33.02■■■□□ 2.88
SIGMAR1-202ENST00000353468 GAPVD1Q14C86 1478 aa33.01■■■□□ 2.88
SIGMAR1-202ENST00000353468 AQRO60306 1485 aaKnown RBP eCLIP33■■■□□ 2.872e-8■■■■■ 30.3
SIGMAR1-202ENST00000353468 IGF1RP08069 1367 aa32.98■■■□□ 2.87
SIGMAR1-202ENST00000353468 EIF4G3O43432 1585 aaKnown RBP32.9■■■□□ 2.86
SIGMAR1-202ENST00000353468 ERICH3Q5RHP9 1530 aa32.88■■■□□ 2.85
SIGMAR1-202ENST00000353468 LOC105371045A0A1W2PR82 267 aa32.86■■■□□ 2.85
SIGMAR1-202ENST00000353468 GRIN2BQ13224 1484 aa32.85■■■□□ 2.85
SIGMAR1-202ENST00000353468 PBRM1Q86U86 1689 aa32.83■■■□□ 2.85
SIGMAR1-202ENST00000353468 PRXQ9BXM0 1461 aa32.83■■■□□ 2.85
SIGMAR1-202ENST00000353468 CARMIL1Q5VZK9 1371 aa32.81■■■□□ 2.84
SIGMAR1-202ENST00000353468 EHMT2Q96KQ7 1210 aa32.8■■■□□ 2.84
SIGMAR1-202ENST00000353468 KIF21BO75037 1637 aa32.79■■■□□ 2.84
SIGMAR1-202ENST00000353468 CUL7Q14999 1698 aa32.75■■■□□ 2.83
SIGMAR1-202ENST00000353468 GOLGA3Q08378 1498 aa32.71■■■□□ 2.83
SIGMAR1-202ENST00000353468 RAPGEF2Q9Y4G8 1499 aa32.71■■■□□ 2.83
SIGMAR1-202ENST00000353468 SNAPC4Q5SXM2 1469 aa32.69■■■□□ 2.82
SIGMAR1-202ENST00000353468 FHAD1B1AJZ9 1412 aa32.66■■■□□ 2.82
SIGMAR1-202ENST00000353468 MAGI1Q96QZ7 1491 aaPredicted RBP32.64■■■□□ 2.82
SIGMAR1-202ENST00000353468 ADAMTS12P58397 1594 aa32.64■■■□□ 2.81
SIGMAR1-202ENST00000353468 UBTFP17480 764 aaKnown RBP32.62■■■□□ 2.81
SIGMAR1-202ENST00000353468 TNIKQ9UKE5 1360 aa32.52■■■□□ 2.8
SIGMAR1-202ENST00000353468 SYNJ2O15056 1496 aa32.52■■■□□ 2.8
SIGMAR1-202ENST00000353468 CHMP7Q8WUX9 453 aaPredicted RBP32.5■■■□□ 2.79
SIGMAR1-202ENST00000353468 FBLN2P98095 1184 aa32.45■■■□□ 2.79
SIGMAR1-202ENST00000353468 GRIN2AQ12879 1464 aa32.43■■■□□ 2.78
SIGMAR1-202ENST00000353468 CHD1O14646 1710 aa32.29■■■□□ 2.76
SIGMAR1-202ENST00000353468 CTTNBP2Q8WZ74 1663 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms