RNA–Protein interactions for RNA: ENST00000371610.6

PARD6B-201, Transcript of par-6 family cell polarity regulator beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARD6B, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-201ENST00000371610 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
PARD6B-201ENST00000371610 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
PARD6B-201ENST00000371610 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
PARD6B-201ENST00000371610 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.06
PARD6B-201ENST00000371610 EHMT2Q96KQ7 1210 aa21.34■■□□□ 1.01
PARD6B-201ENST00000371610 FAM9AQ8IZU1 332 aaPredicted RBP20.78■□□□□ 0.92
PARD6B-201ENST00000371610 TTBK1Q5TCY1 1321 aaPredicted RBP20.59■□□□□ 0.89
PARD6B-201ENST00000371610 PCGF6Q9BYE7 350 aa20.58■□□□□ 0.88
PARD6B-201ENST00000371610 APLP2Q06481 763 aa20.51■□□□□ 0.87
PARD6B-201ENST00000371610 RANGAP1P46060 587 aaPredicted RBP20.31■□□□□ 0.84
PARD6B-201ENST00000371610 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
PARD6B-201ENST00000371610 PELP1Q8IZL8 1130 aaKnown RBP20.15■□□□□ 0.82
PARD6B-201ENST00000371610 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
PARD6B-201ENST00000371610 UBTFP17480 764 aaKnown RBP19.98■□□□□ 0.79
PARD6B-201ENST00000371610 ATP1B4Q9UN42 357 aaPredicted RBP19.96■□□□□ 0.79
PARD6B-201ENST00000371610 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
PARD6B-201ENST00000371610 ZEB1P37275 1124 aaPredicted RBP19.84■□□□□ 0.77
PARD6B-201ENST00000371610 CENPBP07199 599 aaPredicted RBP19.79■□□□□ 0.76
PARD6B-201ENST00000371610 LOC105371045A0A1W2PR82 267 aa19.67■□□□□ 0.74
PARD6B-201ENST00000371610 YTHDC1Q96MU7 727 aaKnown RBP19.65■□□□□ 0.74
PARD6B-201ENST00000371610 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
PARD6B-201ENST00000371610 TRIM26Q12899 539 aaPredicted RBP19.55■□□□□ 0.72
PARD6B-201ENST00000371610 ITGAEP38570 1179 aa19.44■□□□□ 0.7
PARD6B-201ENST00000371610 HRCP23327 699 aa19.43■□□□□ 0.7
PARD6B-201ENST00000371610 ERICH6Q7L0X2 663 aa19.41■□□□□ 0.7
PARD6B-201ENST00000371610 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.69
PARD6B-201ENST00000371610 NEFLP07196 543 aa19.32■□□□□ 0.68
PARD6B-201ENST00000371610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.21■□□□□ 0.67
PARD6B-201ENST00000371610 POLR3GLQ9BT43 218 aa19.15■□□□□ 0.66
PARD6B-201ENST00000371610 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
PARD6B-201ENST00000371610 CNGB1Q14028 1251 aaPredicted RBP19.12■□□□□ 0.65
PARD6B-201ENST00000371610 ABCC9O60706 1549 aa19.1■□□□□ 0.65
PARD6B-201ENST00000371610 MYT1LQ9UL68 1186 aa19.03■□□□□ 0.64
PARD6B-201ENST00000371610 DIEXFQ68CQ4 756 aaKnown RBP18.9■□□□□ 0.62
PARD6B-201ENST00000371610 FAM50AQ14320 339 aaKnown RBP18.84■□□□□ 0.61
PARD6B-201ENST00000371610 NEUROD1Q13562 356 aa18.73■□□□□ 0.59
PARD6B-201ENST00000371610 TRIM52Q96A61 297 aa18.68■□□□□ 0.58
PARD6B-201ENST00000371610 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
PARD6B-201ENST00000371610 DAXXQ9UER7 740 aaPredicted RBP18.64■□□□□ 0.57
PARD6B-201ENST00000371610 MYT1Q01538 1121 aa18.61■□□□□ 0.57
PARD6B-201ENST00000371610 FBLN2P98095 1184 aa18.58■□□□□ 0.57
PARD6B-201ENST00000371610 P3H3Q8IVL6 736 aa18.55■□□□□ 0.56
PARD6B-201ENST00000371610 ZNF326Q5BKZ1 582 aaKnown RBP18.54■□□□□ 0.56
PARD6B-201ENST00000371610 BCANQ96GW7 911 aa18.54■□□□□ 0.56
PARD6B-201ENST00000371610 GTF3C3Q9Y5Q9 886 aa18.54■□□□□ 0.56
PARD6B-201ENST00000371610 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.56
PARD6B-201ENST00000371610 ARID3CA6NKF2 412 aa18.5■□□□□ 0.55
PARD6B-201ENST00000371610 ZNF316A6NFI3 1004 aaPredicted RBP18.43■□□□□ 0.54
PARD6B-201ENST00000371610 CLSPNQ9HAW4 1339 aa18.42■□□□□ 0.54
PARD6B-201ENST00000371610 ANP32CO43423 234 aa18.39■□□□□ 0.53
PARD6B-201ENST00000371610 RTL5Q5HYW3 569 aaPredicted RBP18.27■□□□□ 0.51
PARD6B-201ENST00000371610 ZNF777Q9ULD5 760 aaPredicted RBP18.24■□□□□ 0.51
PARD6B-201ENST00000371610 ACIN1Q9UKV3 1341 aaKnown RBP18.23■□□□□ 0.51
PARD6B-201ENST00000371610 SCRIBQ14160 1630 aa18.22■□□□□ 0.51
PARD6B-201ENST00000371610 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
PARD6B-201ENST00000371610 CDK11AQ9UQ88 783 aaPredicted RBP18.13■□□□□ 0.49
PARD6B-201ENST00000371610 BCL11AQ9H165 835 aa18.13■□□□□ 0.49
PARD6B-201ENST00000371610 DDX10Q13206 875 aaKnown RBP18.07■□□□□ 0.48
PARD6B-201ENST00000371610 CHIC2Q9UKJ5 165 aa18.03■□□□□ 0.48
PARD6B-201ENST00000371610 DCAF1Q9Y4B6 1507 aa18.02■□□□□ 0.48
PARD6B-201ENST00000371610 TONSLQ96HA7 1378 aa18.01■□□□□ 0.47
PARD6B-201ENST00000371610 CANXP27824 592 aaKnown RBP18■□□□□ 0.47
PARD6B-201ENST00000371610 SLC24A1O60721 1099 aa17.99■□□□□ 0.47
PARD6B-201ENST00000371610 FKBP8Q14318 412 aa17.97■□□□□ 0.47
PARD6B-201ENST00000371610 HNRNPUQ00839 825 aaKnown RBP eCLIP17.96■□□□□ 0.47
PARD6B-201ENST00000371610 FAM9BQ8IZU0 186 aa17.94■□□□□ 0.46
PARD6B-201ENST00000371610 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
PARD6B-201ENST00000371610 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
PARD6B-201ENST00000371610 SALL2Q9Y467 1007 aaPredicted RBP17.93■□□□□ 0.46
PARD6B-201ENST00000371610 ZBTB47Q9UFB7 747 aaPredicted RBP17.93■□□□□ 0.46
PARD6B-201ENST00000371610 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
PARD6B-201ENST00000371610 MYO15BQ96JP2 1530 aa17.9■□□□□ 0.46
PARD6B-201ENST00000371610 NPM2Q86SE8 214 aaKnown RBP17.89■□□□□ 0.45
PARD6B-201ENST00000371610 NEFMP07197 916 aa17.86■□□□□ 0.45
PARD6B-201ENST00000371610 MIER1Q8N108 512 aa17.85■□□□□ 0.45
PARD6B-201ENST00000371610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
PARD6B-201ENST00000371610 CLIP1P30622 1438 aa17.82■□□□□ 0.44
PARD6B-201ENST00000371610 NPM1P06748 294 aaKnown RBP eCLIP17.81■□□□□ 0.44
PARD6B-201ENST00000371610 ANP32AP39687 249 aaKnown RBP17.81■□□□□ 0.44
PARD6B-201ENST00000371610 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
PARD6B-201ENST00000371610 MTUS2Q5JR59 1369 aa17.79■□□□□ 0.44
PARD6B-201ENST00000371610 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
PARD6B-201ENST00000371610 ESF1Q9H501 851 aaKnown RBP17.76■□□□□ 0.43
PARD6B-201ENST00000371610 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
PARD6B-201ENST00000371610 RRP7BPQ9NSQ0 103 aa17.75■□□□□ 0.43
PARD6B-201ENST00000371610 MRS2Q9HD23 443 aa17.73■□□□□ 0.43
PARD6B-201ENST00000371610 TSPY4P0CV99 314 aa17.73■□□□□ 0.43
PARD6B-201ENST00000371610 TSPY10P0CW01 314 aa17.73■□□□□ 0.43
PARD6B-201ENST00000371610 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
PARD6B-201ENST00000371610 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
PARD6B-201ENST00000371610 IRX6P78412 446 aaPredicted RBP17.72■□□□□ 0.43
PARD6B-201ENST00000371610 CEP162Q5TB80 1403 aa17.69■□□□□ 0.42
PARD6B-201ENST00000371610 CHMP7Q8WUX9 453 aaPredicted RBP17.68■□□□□ 0.42
PARD6B-201ENST00000371610 SENP3-EIF4A1A0A087X0R7 540 aa17.67■□□□□ 0.42
PARD6B-201ENST00000371610 CCDC136Q96JN2 1154 aa17.66■□□□□ 0.42
PARD6B-201ENST00000371610 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
PARD6B-201ENST00000371610 EIF4G2P78344 907 aaKnown RBP eCLIP17.6■□□□□ 0.41
PARD6B-201ENST00000371610 CCDC180Q9P1Z9 1646 aa17.6■□□□□ 0.41
PARD6B-201ENST00000371610 WRNQ14191 1432 aaPredicted RBP eCLIP17.59■□□□□ 0.41
PARD6B-201ENST00000371610 KCNH8Q96L42 1107 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms