RNA–Protein interactions for RNA: ENST00000446833.1

SDCCAG3-206, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 3

Gene SDCCAG3, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-206ENST00000446833 NISCHQ9Y2I1 1504 aa43.08■■■■■ 4.49
SDCCAG3-206ENST00000446833 CCDC180Q9P1Z9 1646 aa38.64■■■■□ 3.78
SDCCAG3-206ENST00000446833 ABCC9O60706 1549 aa38.63■■■■□ 3.78
SDCCAG3-206ENST00000446833 RB1CC1Q8TDY2 1594 aa36.82■■■■□ 3.48
SDCCAG3-206ENST00000446833 NACADO15069 1562 aa36.59■■■■□ 3.45
SDCCAG3-206ENST00000446833 DCAF8L2P0C7V8 631 aa36.36■■■■□ 3.41
SDCCAG3-206ENST00000446833 DNAJC5BQ9UF47 199 aa36.28■■■■□ 3.4
SDCCAG3-206ENST00000446833 MYO15BQ96JP2 1530 aa36.13■■■■□ 3.38
SDCCAG3-206ENST00000446833 PABPN1Q86U42 306 aaKnown RBP eCLIP35.99■■■■□ 3.35
SDCCAG3-206ENST00000446833 UNC13AQ9UPW8 1703 aa35.88■■■■□ 3.33
SDCCAG3-206ENST00000446833 BICRAQ9NZM4 1560 aa35.7■■■■□ 3.31
SDCCAG3-206ENST00000446833 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
SDCCAG3-206ENST00000446833 DCAF1Q9Y4B6 1507 aa35.64■■■■□ 3.3
SDCCAG3-206ENST00000446833 SHROOM4Q9ULL8 1493 aa35.35■■■■□ 3.25
SDCCAG3-206ENST00000446833 SCRIBQ14160 1630 aa35.15■■■■□ 3.22
SDCCAG3-206ENST00000446833 CC2D2AQ9P2K1 1620 aa34.91■■■■□ 3.18
SDCCAG3-206ENST00000446833 EIF4G1Q04637 1599 aaKnown RBP34.85■■■■□ 3.17
SDCCAG3-206ENST00000446833 CECR2Q9BXF3 1484 aa34.84■■■■□ 3.17
SDCCAG3-206ENST00000446833 NCAPD3P42695 1498 aa33.8■■■■□ 3
SDCCAG3-206ENST00000446833 ATAD2BQ9ULI0 1458 aa33.66■■■□□ 2.98
SDCCAG3-206ENST00000446833 SMARCA2P51531 1590 aa33.58■■■□□ 2.97
SDCCAG3-206ENST00000446833 SMARCA4P51532 1647 aa33.57■■■□□ 2.97
SDCCAG3-206ENST00000446833 HMGXB3Q12766 1538 aa33.51■■■□□ 2.95
SDCCAG3-206ENST00000446833 BAZ1AQ9NRL2 1556 aaPredicted RBP33.45■■■□□ 2.95
SDCCAG3-206ENST00000446833 ERCC6Q03468 1493 aa33.4■■■□□ 2.94
SDCCAG3-206ENST00000446833 DNAJC5Q9H3Z4 198 aa33.4■■■□□ 2.94
SDCCAG3-206ENST00000446833 CUX2O14529 1486 aa33.38■■■□□ 2.93
SDCCAG3-206ENST00000446833 BAZ1BQ9UIG0 1483 aaKnown RBP33.32■■■□□ 2.92
SDCCAG3-206ENST00000446833 PEG3Q9GZU2 1588 aa33.3■■■□□ 2.92
SDCCAG3-206ENST00000446833 NESP48681 1621 aa33.17■■■□□ 2.9
SDCCAG3-206ENST00000446833 MROH2BQ7Z745 1585 aa33.16■■■□□ 2.9
SDCCAG3-206ENST00000446833 LAMC3Q9Y6N6 1575 aa33■■■□□ 2.87
SDCCAG3-206ENST00000446833 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
SDCCAG3-206ENST00000446833 THOC2Q8NI27 1593 aaKnown RBP32.84■■■□□ 2.85
SDCCAG3-206ENST00000446833 CADPSQ9ULU8 1353 aa32.77■■■□□ 2.84
SDCCAG3-206ENST00000446833 WIZO95785 1651 aa32.72■■■□□ 2.83
SDCCAG3-206ENST00000446833 KIF21AQ7Z4S6 1674 aa32.71■■■□□ 2.83
SDCCAG3-206ENST00000446833 MRC2Q9UBG0 1479 aa32.53■■■□□ 2.8
SDCCAG3-206ENST00000446833 RSF1Q96T23 1441 aaPredicted RBP32.51■■■□□ 2.79
SDCCAG3-206ENST00000446833 WDR62O43379 1518 aa32.44■■■□□ 2.78
SDCCAG3-206ENST00000446833 CEP164Q9UPV0 1460 aa32.39■■■□□ 2.78
SDCCAG3-206ENST00000446833 CFTRP13569 1480 aa32.38■■■□□ 2.77
SDCCAG3-206ENST00000446833 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
SDCCAG3-206ENST00000446833 FANCD2Q9BXW9 1451 aa32.35■■■□□ 2.77
SDCCAG3-206ENST00000446833 URB2Q14146 1524 aaKnown RBP32.06■■■□□ 2.72
SDCCAG3-206ENST00000446833 CCDC88BA6NC98 1476 aa32.01■■■□□ 2.71
SDCCAG3-206ENST00000446833 PRDM2Q13029 1718 aa31.95■■■□□ 2.71
SDCCAG3-206ENST00000446833 OSCARQ8IYS5 282 aa31.89■■■□□ 2.7
SDCCAG3-206ENST00000446833 TRIM41Q8WV44 630 aa31.85■■■□□ 2.69
SDCCAG3-206ENST00000446833 IFT140Q96RY7 1462 aa31.78■■■□□ 2.68
SDCCAG3-206ENST00000446833 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
SDCCAG3-206ENST00000446833 TOPBP1Q92547 1522 aa31.73■■■□□ 2.67
SDCCAG3-206ENST00000446833 ZNF608Q9ULD9 1512 aaPredicted RBP31.66■■■□□ 2.66
SDCCAG3-206ENST00000446833 DNMBPQ6XZF7 1577 aa31.61■■■□□ 2.65
SDCCAG3-206ENST00000446833 EIF4G3O43432 1585 aaKnown RBP31.47■■■□□ 2.63
SDCCAG3-206ENST00000446833 TARBP1Q13395 1621 aaKnown RBP31.43■■■□□ 2.62
SDCCAG3-206ENST00000446833 POLA1P09884 1462 aaPredicted RBP31.4■■■□□ 2.62
SDCCAG3-206ENST00000446833 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.62
SDCCAG3-206ENST00000446833 RIMBP3CA6NJZ7 1639 aa31.36■■■□□ 2.61
SDCCAG3-206ENST00000446833 RIMBP3BA6NNM3 1639 aa31.36■■■□□ 2.61
SDCCAG3-206ENST00000446833 RIMBP3Q9UFD9 1639 aa31.36■■■□□ 2.61
SDCCAG3-206ENST00000446833 ARHGEF11O15085 1522 aa31.29■■■□□ 2.6
SDCCAG3-206ENST00000446833 SOGA1O94964 1423 aa31.29■■■□□ 2.6
SDCCAG3-206ENST00000446833 RAD54L2Q9Y4B4 1467 aa31.27■■■□□ 2.6
SDCCAG3-206ENST00000446833 TDRD9Q8NDG6 1382 aaKnown RBP31.21■■■□□ 2.59
SDCCAG3-206ENST00000446833 FBLN2P98095 1184 aa31.21■■■□□ 2.59
SDCCAG3-206ENST00000446833 CHD1O14646 1710 aa31.21■■■□□ 2.59
SDCCAG3-206ENST00000446833 FGD5Q6ZNL6 1462 aa31.2■■■□□ 2.58
SDCCAG3-206ENST00000446833 WDR97A6NE52 1622 aa31.18■■■□□ 2.58
SDCCAG3-206ENST00000446833 CUX1P39880 1505 aa31.16■■■□□ 2.58
SDCCAG3-206ENST00000446833 CYB5RLQ6IPT4 315 aa31.1■■■□□ 2.57
SDCCAG3-206ENST00000446833 SNAPC4Q5SXM2 1469 aa31.07■■■□□ 2.56
SDCCAG3-206ENST00000446833 MAGI1Q96QZ7 1491 aaPredicted RBP31.03■■■□□ 2.56
SDCCAG3-206ENST00000446833 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
SDCCAG3-206ENST00000446833 GRIN2BQ13224 1484 aa31.02■■■□□ 2.56
SDCCAG3-206ENST00000446833 CHMP7Q8WUX9 453 aaPredicted RBP31.02■■■□□ 2.56
SDCCAG3-206ENST00000446833 ARAP1Q96P48 1450 aa30.97■■■□□ 2.55
SDCCAG3-206ENST00000446833 SYNJ2O15056 1496 aa30.92■■■□□ 2.54
SDCCAG3-206ENST00000446833 GAPVD1Q14C86 1478 aa30.91■■■□□ 2.54
SDCCAG3-206ENST00000446833 CLASP1Q7Z460 1538 aa30.91■■■□□ 2.54
SDCCAG3-206ENST00000446833 SYNJ1O43426 1573 aa30.91■■■□□ 2.54
SDCCAG3-206ENST00000446833 ABCA10Q8WWZ4 1543 aa30.88■■■□□ 2.53
SDCCAG3-206ENST00000446833 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
SDCCAG3-206ENST00000446833 ABCA5Q8WWZ7 1642 aa30.78■■■□□ 2.52
SDCCAG3-206ENST00000446833 WRNQ14191 1432 aaPredicted RBP eCLIP30.78■■■□□ 2.52
SDCCAG3-206ENST00000446833 TRHP20396 242 aaPredicted RBP30.74■■■□□ 2.51
SDCCAG3-206ENST00000446833 TOP2BQ02880 1626 aa30.67■■■□□ 2.5
SDCCAG3-206ENST00000446833 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
SDCCAG3-206ENST00000446833 GRIN2AQ12879 1464 aa30.61■■■□□ 2.49
SDCCAG3-206ENST00000446833 ADAMTS12P58397 1594 aa30.55■■■□□ 2.48
SDCCAG3-206ENST00000446833 FHAD1B1AJZ9 1412 aa30.53■■■□□ 2.48
SDCCAG3-206ENST00000446833 NUP160Q12769 1436 aa30.53■■■□□ 2.48
SDCCAG3-206ENST00000446833 ERICH3Q5RHP9 1530 aa30.5■■■□□ 2.47
SDCCAG3-206ENST00000446833 CEP170Q5SW79 1584 aa30.45■■■□□ 2.46
SDCCAG3-206ENST00000446833 ERCC6L2Q5T890 1561 aa30.37■■■□□ 2.45
SDCCAG3-206ENST00000446833 SHROOM2Q13796 1616 aa30.35■■■□□ 2.45
SDCCAG3-206ENST00000446833 JPH4Q96JJ6 628 aa30.24■■■□□ 2.43
SDCCAG3-206ENST00000446833 PRG4Q92954 1404 aaPredicted RBP30.22■■■□□ 2.43
SDCCAG3-206ENST00000446833 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
SDCCAG3-206ENST00000446833 IGF1RP08069 1367 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 328.3 ms