RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 PELP1Q8IZL8 1130 aaKnown RBP17.31■□□□□ 0.36
CCDC85C-201ENST00000380243 MYT1Q01538 1121 aa17.19■□□□□ 0.34
CCDC85C-201ENST00000380243 DCAF8L2P0C7V8 631 aa16.7■□□□□ 0.26
CCDC85C-201ENST00000380243 SUPT5HO00267 1087 aaKnown RBP16.51■□□□□ 0.23
CCDC85C-201ENST00000380243 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
CCDC85C-201ENST00000380243 PCGF6Q9BYE7 350 aa16.41■□□□□ 0.22
CCDC85C-201ENST00000380243 ZEB1P37275 1124 aaPredicted RBP16.33■□□□□ 0.2
CCDC85C-201ENST00000380243 ERICH6Q7L0X2 663 aa16.31■□□□□ 0.2
CCDC85C-201ENST00000380243 CCER1Q8TC90 406 aaPredicted RBP16.26■□□□□ 0.19
CCDC85C-201ENST00000380243 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
CCDC85C-201ENST00000380243 HRCP23327 699 aa15.97■□□□□ 0.15
CCDC85C-201ENST00000380243 NEFLP07196 543 aa15.89■□□□□ 0.13
CCDC85C-201ENST00000380243 SHROOM4Q9ULL8 1493 aa15.88■□□□□ 0.13
CCDC85C-201ENST00000380243 APLP2Q06481 763 aa15.85■□□□□ 0.13
CCDC85C-201ENST00000380243 YTHDC1Q96MU7 727 aaKnown RBP15.83■□□□□ 0.13
CCDC85C-201ENST00000380243 TTBK1Q5TCY1 1321 aaPredicted RBP15.81■□□□□ 0.12
CCDC85C-201ENST00000380243 FAM9AQ8IZU1 332 aaPredicted RBP15.56■□□□□ 0.08
CCDC85C-201ENST00000380243 TRIM26Q12899 539 aaPredicted RBP15.55■□□□□ 0.08
CCDC85C-201ENST00000380243 DAXXQ9UER7 740 aaPredicted RBP15.49■□□□□ 0.07
CCDC85C-201ENST00000380243 PPARGC1BQ86YN6 1023 aaKnown RBP15.47■□□□□ 0.07
CCDC85C-201ENST00000380243 NISCHQ9Y2I1 1504 aa15.46■□□□□ 0.06
CCDC85C-201ENST00000380243 RTL5Q5HYW3 569 aaPredicted RBP15.42■□□□□ 0.06
CCDC85C-201ENST00000380243 GTF3C3Q9Y5Q9 886 aa15.3■□□□□ 0.04
CCDC85C-201ENST00000380243 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
CCDC85C-201ENST00000380243 DIEXFQ68CQ4 756 aaKnown RBP15.26■□□□□ 0.03
CCDC85C-201ENST00000380243 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
CCDC85C-201ENST00000380243 RANGAP1P46060 587 aaPredicted RBP15.12■□□□□ 0.01
CCDC85C-201ENST00000380243 ZNF316A6NFI3 1004 aaPredicted RBP15.11■□□□□ 0.01
CCDC85C-201ENST00000380243 UBTFP17480 764 aaKnown RBP15.09■□□□□ 0.01
CCDC85C-201ENST00000380243 LOC105371045A0A1W2PR82 267 aa15□□□□□ -0.01
CCDC85C-201ENST00000380243 CDK11AQ9UQ88 783 aaPredicted RBP15□□□□□ -0.01
CCDC85C-201ENST00000380243 BCANQ96GW7 911 aa14.98□□□□□ -0.01
CCDC85C-201ENST00000380243 ATP1B4Q9UN42 357 aaPredicted RBP14.97□□□□□ -0.01
CCDC85C-201ENST00000380243 MYT1LQ9UL68 1186 aa14.97□□□□□ -0.01
CCDC85C-201ENST00000380243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
CCDC85C-201ENST00000380243 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
CCDC85C-201ENST00000380243 EIF5BO60841 1220 aaKnown RBP14.91□□□□□ -0.02
CCDC85C-201ENST00000380243 GLIPR1L2Q4G1C9 344 aa14.9□□□□□ -0.02
CCDC85C-201ENST00000380243 CLSPNQ9HAW4 1339 aa14.89□□□□□ -0.03
CCDC85C-201ENST00000380243 SCAF1Q9H7N4 1312 aaKnown RBP14.84□□□□□ -0.03
CCDC85C-201ENST00000380243 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
CCDC85C-201ENST00000380243 POLR3GLQ9BT43 218 aa14.78□□□□□ -0.04
CCDC85C-201ENST00000380243 ANP32AP39687 249 aaKnown RBP14.76□□□□□ -0.05
CCDC85C-201ENST00000380243 CNGB1Q14028 1251 aaPredicted RBP14.7□□□□□ -0.06
CCDC85C-201ENST00000380243 NEUROD1Q13562 356 aa14.69□□□□□ -0.06
CCDC85C-201ENST00000380243 ITGAEP38570 1179 aa14.66□□□□□ -0.06
CCDC85C-201ENST00000380243 ANP32CO43423 234 aa14.66□□□□□ -0.06
CCDC85C-201ENST00000380243 ANP32EQ9BTT0 268 aa14.62□□□□□ -0.07
CCDC85C-201ENST00000380243 BCL11AQ9H165 835 aa14.57□□□□□ -0.08
CCDC85C-201ENST00000380243 NBR1Q14596 966 aa14.53□□□□□ -0.08
CCDC85C-201ENST00000380243 FKBP8Q14318 412 aa14.51□□□□□ -0.09
CCDC85C-201ENST00000380243 ANP32BQ92688 251 aaKnown RBP14.5□□□□□ -0.09
CCDC85C-201ENST00000380243 NPM2Q86SE8 214 aaKnown RBP14.47□□□□□ -0.09
CCDC85C-201ENST00000380243 ZBTB47Q9UFB7 747 aaPredicted RBP14.43□□□□□ -0.1
CCDC85C-201ENST00000380243 TNNT2P45379 298 aaPredicted RBP14.3□□□□□ -0.12
CCDC85C-201ENST00000380243 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
CCDC85C-201ENST00000380243 MIER1Q8N108 512 aa14.28□□□□□ -0.12
CCDC85C-201ENST00000380243 CANXP27824 592 aaKnown RBP14.25□□□□□ -0.13
CCDC85C-201ENST00000380243 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
CCDC85C-201ENST00000380243 ERICH6BQ5W0A0 696 aa14.24□□□□□ -0.13
CCDC85C-201ENST00000380243 FAM50AQ14320 339 aaKnown RBP14.23□□□□□ -0.13
CCDC85C-201ENST00000380243 CCDC136Q96JN2 1154 aa14.23□□□□□ -0.13
CCDC85C-201ENST00000380243 NEFMP07197 916 aa14.22□□□□□ -0.13
CCDC85C-201ENST00000380243 HSP90AA1P07900 732 aaKnown RBP14.21□□□□□ -0.14
CCDC85C-201ENST00000380243 UPF2Q9HAU5 1272 aaKnown RBP14.19□□□□□ -0.14
CCDC85C-201ENST00000380243 TRIM52Q96A61 297 aa14.19□□□□□ -0.14
CCDC85C-201ENST00000380243 HNRNPUQ00839 825 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC85C-201ENST00000380243 DDRGK1Q96HY6 314 aa14.15□□□□□ -0.14
CCDC85C-201ENST00000380243 DEKP35659 375 aaKnown RBP14.15□□□□□ -0.14
CCDC85C-201ENST00000380243 RTN4Q9NQC3 1192 aaKnown RBP14.13□□□□□ -0.15
CCDC85C-201ENST00000380243 ARXQ96QS3 562 aa14.12□□□□□ -0.15
CCDC85C-201ENST00000380243 NAP1L5Q96NT1 182 aaPredicted RBP14.11□□□□□ -0.15
CCDC85C-201ENST00000380243 NOP58Q9Y2X3 529 aaKnown RBP14.09□□□□□ -0.15
CCDC85C-201ENST00000380243 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
CCDC85C-201ENST00000380243 PPM1GO15355 546 aaPredicted RBP14.07□□□□□ -0.16
CCDC85C-201ENST00000380243 ZNF326Q5BKZ1 582 aaKnown RBP14.07□□□□□ -0.16
CCDC85C-201ENST00000380243 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
CCDC85C-201ENST00000380243 BECN1Q14457 450 aa14.05□□□□□ -0.16
CCDC85C-201ENST00000380243 TRIM44Q96DX7 344 aaPredicted RBP14.04□□□□□ -0.16
CCDC85C-201ENST00000380243 SUPT16HQ9Y5B9 1047 aaKnown RBP14.04□□□□□ -0.16
CCDC85C-201ENST00000380243 IRX6P78412 446 aaPredicted RBP14.03□□□□□ -0.16
CCDC85C-201ENST00000380243 NCLP19338 710 aaKnown RBP14.01□□□□□ -0.17
CCDC85C-201ENST00000380243 FAM9BQ8IZU0 186 aa13.99□□□□□ -0.17
CCDC85C-201ENST00000380243 LAS1LQ9Y4W2 734 aaKnown RBP13.98□□□□□ -0.17
CCDC85C-201ENST00000380243 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.98□□□□□ -0.17
CCDC85C-201ENST00000380243 CDK11BP21127 795 aaKnown RBP13.95□□□□□ -0.18
CCDC85C-201ENST00000380243 RBM19Q9Y4C8 960 aaKnown RBP13.94□□□□□ -0.18
CCDC85C-201ENST00000380243 PPP4R2Q9NY27 417 aa13.93□□□□□ -0.18
CCDC85C-201ENST00000380243 MRS2Q9HD23 443 aa13.92□□□□□ -0.18
CCDC85C-201ENST00000380243 GOLGA6L22H0YM25 854 aa13.91□□□□□ -0.18
CCDC85C-201ENST00000380243 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
CCDC85C-201ENST00000380243 PTMAP06454 111 aaKnown RBP13.88□□□□□ -0.19
CCDC85C-201ENST00000380243 TMC1Q8TDI8 760 aa13.88□□□□□ -0.19
CCDC85C-201ENST00000380243 SALL2Q9Y467 1007 aaPredicted RBP13.87□□□□□ -0.19
CCDC85C-201ENST00000380243 L1TD1Q5T7N2 865 aaKnown RBP13.87□□□□□ -0.19
CCDC85C-201ENST00000380243 TONSLQ96HA7 1378 aa13.86□□□□□ -0.19
CCDC85C-201ENST00000380243 TSHZ2Q9NRE2 1034 aa13.83□□□□□ -0.2
CCDC85C-201ENST00000380243 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
CCDC85C-201ENST00000380243 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
CCDC85C-201ENST00000380243 DNTTIP2Q5QJE6 756 aaKnown RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms