RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 NISCHQ9Y2I1 1504 aa47.59■■■■■ 5.21
PTBP1-215ENST00000589883 CCDC180Q9P1Z9 1646 aa42.73■■■■■ 4.43
PTBP1-215ENST00000589883 ABCC9O60706 1549 aa42.66■■■■■ 4.42
PTBP1-215ENST00000589883 RB1CC1Q8TDY2 1594 aa40.69■■■■■ 4.11
PTBP1-215ENST00000589883 NACADO15069 1562 aa40.43■■■■■ 4.06
PTBP1-215ENST00000589883 DCAF8L2P0C7V8 631 aa40.22■■■■■ 4.03
PTBP1-215ENST00000589883 DNAJC5BQ9UF47 199 aa39.93■■■■□ 3.98
PTBP1-215ENST00000589883 MYO15BQ96JP2 1530 aa39.89■■■■□ 3.98
PTBP1-215ENST00000589883 PABPN1Q86U42 306 aaKnown RBP eCLIP39.72■■■■□ 3.95
PTBP1-215ENST00000589883 UNC13AQ9UPW8 1703 aa39.65■■■■□ 3.94
PTBP1-215ENST00000589883 ZCCHC6Q5VYS8 1495 aaKnown RBP39.43■■■■□ 3.9
PTBP1-215ENST00000589883 BICRAQ9NZM4 1560 aa39.38■■■■□ 3.9
PTBP1-215ENST00000589883 DCAF1Q9Y4B6 1507 aa39.36■■■■□ 3.89
PTBP1-215ENST00000589883 SHROOM4Q9ULL8 1493 aa39.04■■■■□ 3.84
PTBP1-215ENST00000589883 SCRIBQ14160 1630 aa38.87■■■■□ 3.81
PTBP1-215ENST00000589883 CC2D2AQ9P2K1 1620 aa38.55■■■■□ 3.76
PTBP1-215ENST00000589883 EIF4G1Q04637 1599 aaKnown RBP38.48■■■■□ 3.75
PTBP1-215ENST00000589883 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
PTBP1-215ENST00000589883 NCAPD3P42695 1498 aa37.3■■■■□ 3.56
PTBP1-215ENST00000589883 ATAD2BQ9ULI0 1458 aa37.15■■■■□ 3.54
PTBP1-215ENST00000589883 SMARCA2P51531 1590 aa37.12■■■■□ 3.53
PTBP1-215ENST00000589883 SMARCA4P51532 1647 aa37.1■■■■□ 3.53
PTBP1-215ENST00000589883 HMGXB3Q12766 1538 aa37.02■■■■□ 3.52
PTBP1-215ENST00000589883 BAZ1AQ9NRL2 1556 aaPredicted RBP36.99■■■■□ 3.51
PTBP1-215ENST00000589883 ERCC6Q03468 1493 aa36.93■■■■□ 3.5
PTBP1-215ENST00000589883 CUX2O14529 1486 aa36.86■■■■□ 3.49
PTBP1-215ENST00000589883 BAZ1BQ9UIG0 1483 aaKnown RBP36.83■■■■□ 3.49
PTBP1-215ENST00000589883 DNAJC5Q9H3Z4 198 aa36.8■■■■□ 3.48
PTBP1-215ENST00000589883 PEG3Q9GZU2 1588 aa36.77■■■■□ 3.48
PTBP1-215ENST00000589883 MROH2BQ7Z745 1585 aa36.61■■■■□ 3.45
PTBP1-215ENST00000589883 NESP48681 1621 aa36.6■■■■□ 3.45
PTBP1-215ENST00000589883 LAMC3Q9Y6N6 1575 aa36.48■■■■□ 3.43
PTBP1-215ENST00000589883 PDS5BQ9NTI5 1447 aa36.31■■■■□ 3.4
PTBP1-215ENST00000589883 THOC2Q8NI27 1593 aaKnown RBP36.26■■■■□ 3.39
PTBP1-215ENST00000589883 CADPSQ9ULU8 1353 aa36.18■■■■□ 3.38
PTBP1-215ENST00000589883 WIZO95785 1651 aa36.16■■■■□ 3.38
PTBP1-215ENST00000589883 KIF21AQ7Z4S6 1674 aa36.16■■■■□ 3.38
PTBP1-215ENST00000589883 MRC2Q9UBG0 1479 aa35.93■■■■□ 3.34
PTBP1-215ENST00000589883 RSF1Q96T23 1441 aaPredicted RBP35.9■■■■□ 3.34
PTBP1-215ENST00000589883 WDR62O43379 1518 aa35.82■■■■□ 3.32
PTBP1-215ENST00000589883 CEP164Q9UPV0 1460 aa35.8■■■■□ 3.32
PTBP1-215ENST00000589883 TOP2AP11388 1531 aaKnown RBP35.78■■■■□ 3.32
PTBP1-215ENST00000589883 CFTRP13569 1480 aa35.74■■■■□ 3.31
PTBP1-215ENST00000589883 FANCD2Q9BXW9 1451 aa35.74■■■■□ 3.31
PTBP1-215ENST00000589883 URB2Q14146 1524 aaKnown RBP35.39■■■■□ 3.26
PTBP1-215ENST00000589883 PRDM2Q13029 1718 aa35.38■■■■□ 3.25
PTBP1-215ENST00000589883 CCDC88BA6NC98 1476 aa35.35■■■■□ 3.25
PTBP1-215ENST00000589883 OSCARQ8IYS5 282 aa35.21■■■■□ 3.23
PTBP1-215ENST00000589883 TRIM41Q8WV44 630 aa35.18■■■■□ 3.22
PTBP1-215ENST00000589883 IFT140Q96RY7 1462 aa35.1■■■■□ 3.21
PTBP1-215ENST00000589883 ABCC8Q09428 1581 aa35.1■■■■□ 3.21
PTBP1-215ENST00000589883 TOPBP1Q92547 1522 aa35.05■■■■□ 3.2
PTBP1-215ENST00000589883 ZNF608Q9ULD9 1512 aaPredicted RBP34.94■■■■□ 3.18
PTBP1-215ENST00000589883 DNMBPQ6XZF7 1577 aa34.94■■■■□ 3.18
PTBP1-215ENST00000589883 EIF4G3O43432 1585 aaKnown RBP34.78■■■■□ 3.16
PTBP1-215ENST00000589883 SUPT5HO00267 1087 aaKnown RBP34.76■■■■□ 3.16
PTBP1-215ENST00000589883 TARBP1Q13395 1621 aaKnown RBP34.7■■■■□ 3.15
PTBP1-215ENST00000589883 POLA1P09884 1462 aaPredicted RBP34.69■■■■□ 3.14
PTBP1-215ENST00000589883 AQRO60306 1485 aaKnown RBP eCLIP34.65■■■■□ 3.144e-22■■■■■ 57.8
PTBP1-215ENST00000589883 RIMBP3CA6NJZ7 1639 aa34.63■■■■□ 3.13
PTBP1-215ENST00000589883 RIMBP3BA6NNM3 1639 aa34.63■■■■□ 3.13
PTBP1-215ENST00000589883 RIMBP3Q9UFD9 1639 aa34.63■■■■□ 3.13
PTBP1-215ENST00000589883 SOGA1O94964 1423 aa34.57■■■■□ 3.13
PTBP1-215ENST00000589883 ARHGEF11O15085 1522 aa34.55■■■■□ 3.12
PTBP1-215ENST00000589883 RAD54L2Q9Y4B4 1467 aa34.52■■■■□ 3.12
PTBP1-215ENST00000589883 CHD1O14646 1710 aa34.51■■■■□ 3.12
PTBP1-215ENST00000589883 FBLN2P98095 1184 aa34.51■■■■□ 3.12
PTBP1-215ENST00000589883 WDR97A6NE52 1622 aa34.48■■■■□ 3.11
PTBP1-215ENST00000589883 FGD5Q6ZNL6 1462 aa34.47■■■■□ 3.11
PTBP1-215ENST00000589883 TDRD9Q8NDG6 1382 aaKnown RBP34.46■■■■□ 3.11
PTBP1-215ENST00000589883 CUX1P39880 1505 aa34.41■■■■□ 3.1
PTBP1-215ENST00000589883 CYB5RLQ6IPT4 315 aa34.34■■■■□ 3.09
PTBP1-215ENST00000589883 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
PTBP1-215ENST00000589883 MAGI1Q96QZ7 1491 aaPredicted RBP34.3■■■■□ 3.08
PTBP1-215ENST00000589883 CHMP7Q8WUX9 453 aaPredicted RBP34.29■■■■□ 3.08
PTBP1-215ENST00000589883 GRIN2BQ13224 1484 aa34.28■■■■□ 3.08
PTBP1-215ENST00000589883 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
PTBP1-215ENST00000589883 ARAP1Q96P48 1450 aa34.18■■■■□ 3.06
PTBP1-215ENST00000589883 SYNJ2O15056 1496 aa34.16■■■■□ 3.06
PTBP1-215ENST00000589883 GAPVD1Q14C86 1478 aa34.15■■■■□ 3.06
PTBP1-215ENST00000589883 CLASP1Q7Z460 1538 aa34.12■■■■□ 3.05
PTBP1-215ENST00000589883 ABCA10Q8WWZ4 1543 aa34.11■■■■□ 3.05
PTBP1-215ENST00000589883 PBRM1Q86U86 1689 aa34.09■■■■□ 3.05
PTBP1-215ENST00000589883 WRNQ14191 1432 aaPredicted RBP eCLIP34.02■■■■□ 3.044e-6■□□□□ 10.4
PTBP1-215ENST00000589883 ABCA5Q8WWZ7 1642 aa34.01■■■■□ 3.04
PTBP1-215ENST00000589883 TRHP20396 242 aaPredicted RBP34■■■■□ 3.03
PTBP1-215ENST00000589883 TOP2BQ02880 1626 aa33.9■■■■□ 3.02
PTBP1-215ENST00000589883 BIVM-ERCC5R4GMW8 1640 aa33.9■■■■□ 3.02
PTBP1-215ENST00000589883 GRIN2AQ12879 1464 aa33.81■■■■□ 3
PTBP1-215ENST00000589883 ADAMTS12P58397 1594 aa33.77■■■■□ 3
PTBP1-215ENST00000589883 FHAD1B1AJZ9 1412 aa33.74■■■□□ 2.99
PTBP1-215ENST00000589883 ERICH3Q5RHP9 1530 aa33.71■■■□□ 2.99
PTBP1-215ENST00000589883 NUP160Q12769 1436 aa33.7■■■□□ 2.98
PTBP1-215ENST00000589883 CEP170Q5SW79 1584 aa33.64■■■□□ 2.98
PTBP1-215ENST00000589883 SHROOM2Q13796 1616 aa33.52■■■□□ 2.96
PTBP1-215ENST00000589883 ERCC6L2Q5T890 1561 aa33.51■■■□□ 2.96
PTBP1-215ENST00000589883 JPH4Q96JJ6 628 aa33.4■■■□□ 2.94
PTBP1-215ENST00000589883 PRG4Q92954 1404 aaPredicted RBP33.38■■■□□ 2.93
PTBP1-215ENST00000589883 KIF27Q86VH2 1401 aa33.32■■■□□ 2.92
PTBP1-215ENST00000589883 RUSC2Q8N2Y8 1516 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms