RNA–Protein interactions for RNA: ENST00000397128.6

PRKAA1-204, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAA1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-204ENST00000397128 NISCHQ9Y2I1 1504 aa11.32□□□□□ -0.6
PRKAA1-204ENST00000397128 DCAF8L2P0C7V8 631 aa9.88□□□□□ -0.83
PRKAA1-204ENST00000397128 CCDC180Q9P1Z9 1646 aa9.86□□□□□ -0.83
PRKAA1-204ENST00000397128 ZCCHC6Q5VYS8 1495 aaKnown RBP9.47□□□□□ -0.89
PRKAA1-204ENST00000397128 SHROOM4Q9ULL8 1493 aa9.47□□□□□ -0.89
PRKAA1-204ENST00000397128 ABCC9O60706 1549 aa9.44□□□□□ -0.9
PRKAA1-204ENST00000397128 DCAF1Q9Y4B6 1507 aa9.35□□□□□ -0.91
PRKAA1-204ENST00000397128 NACADO15069 1562 aa9.29□□□□□ -0.92
PRKAA1-204ENST00000397128 SUPT5HO00267 1087 aaKnown RBP9.28□□□□□ -0.92
PRKAA1-204ENST00000397128 RB1CC1Q8TDY2 1594 aa9.27□□□□□ -0.93
PRKAA1-204ENST00000397128 MYO15BQ96JP2 1530 aa9.24□□□□□ -0.93
PRKAA1-204ENST00000397128 SCRIBQ14160 1630 aa9.12□□□□□ -0.95
PRKAA1-204ENST00000397128 PABPN1Q86U42 306 aaKnown RBP eCLIP8.96□□□□□ -0.97
PRKAA1-204ENST00000397128 BAZ1AQ9NRL2 1556 aaPredicted RBP8.86□□□□□ -0.99
PRKAA1-204ENST00000397128 TRIM41Q8WV44 630 aa8.8□□□□□ -1
PRKAA1-204ENST00000397128 RSF1Q96T23 1441 aaPredicted RBP8.78□□□□□ -1
PRKAA1-204ENST00000397128 SMARCA2P51531 1590 aa8.72□□□□□ -1.01
PRKAA1-204ENST00000397128 BAZ1BQ9UIG0 1483 aaKnown RBP8.7□□□□□ -1.02
PRKAA1-204ENST00000397128 CECR2Q9BXF3 1484 aa8.69□□□□□ -1.02
PRKAA1-204ENST00000397128 CHIC1Q5VXU3 224 aa8.68□□□□□ -1.02
PRKAA1-204ENST00000397128 SMARCA4P51532 1647 aa8.68□□□□□ -1.02
PRKAA1-204ENST00000397128 MROH2BQ7Z745 1585 aa8.66□□□□□ -1.02
PRKAA1-204ENST00000397128 TOP2AP11388 1531 aaKnown RBP8.64□□□□□ -1.03
PRKAA1-204ENST00000397128 FAM9AQ8IZU1 332 aaPredicted RBP8.63□□□□□ -1.03
PRKAA1-204ENST00000397128 BICRAQ9NZM4 1560 aa8.59□□□□□ -1.03
PRKAA1-204ENST00000397128 UNC13AQ9UPW8 1703 aa8.59□□□□□ -1.03
PRKAA1-204ENST00000397128 ATAD2BQ9ULI0 1458 aa8.57□□□□□ -1.04
PRKAA1-204ENST00000397128 WIZO95785 1651 aa8.57□□□□□ -1.04
PRKAA1-204ENST00000397128 APLP2Q06481 763 aa8.56□□□□□ -1.04
PRKAA1-204ENST00000397128 EIF4G1Q04637 1599 aaKnown RBP8.54□□□□□ -1.04
PRKAA1-204ENST00000397128 UBTFP17480 764 aaKnown RBP8.52□□□□□ -1.05
PRKAA1-204ENST00000397128 NCAPD3P42695 1498 aa8.52□□□□□ -1.05
PRKAA1-204ENST00000397128 CCDC88BA6NC98 1476 aa8.51□□□□□ -1.05
PRKAA1-204ENST00000397128 HMGXB3Q12766 1538 aa8.5□□□□□ -1.05
PRKAA1-204ENST00000397128 EEA1Q15075 1411 aa8.49□□□□□ -1.05
PRKAA1-204ENST00000397128 EHMT2Q96KQ7 1210 aa8.48□□□□□ -1.05
PRKAA1-204ENST00000397128 PEG3Q9GZU2 1588 aa8.47□□□□□ -1.05
PRKAA1-204ENST00000397128 WRNQ14191 1432 aaPredicted RBP eCLIP8.46□□□□□ -1.06
PRKAA1-204ENST00000397128 PDS5BQ9NTI5 1447 aa8.42□□□□□ -1.06
PRKAA1-204ENST00000397128 CSRNP3Q8WYN3 585 aa8.41□□□□□ -1.06
PRKAA1-204ENST00000397128 CADPSQ9ULU8 1353 aa8.41□□□□□ -1.06
PRKAA1-204ENST00000397128 CC2D2AQ9P2K1 1620 aa8.4□□□□□ -1.06
PRKAA1-204ENST00000397128 ABCC8Q09428 1581 aa8.37□□□□□ -1.07
PRKAA1-204ENST00000397128 KIF27Q86VH2 1401 aa8.35□□□□□ -1.07
PRKAA1-204ENST00000397128 ERCC6Q03468 1493 aa8.35□□□□□ -1.07
PRKAA1-204ENST00000397128 LOC105371045A0A1W2PR82 267 aa8.33□□□□□ -1.08
PRKAA1-204ENST00000397128 CEP164Q9UPV0 1460 aa8.32□□□□□ -1.08
PRKAA1-204ENST00000397128 RANGAP1P46060 587 aaPredicted RBP8.32□□□□□ -1.08
PRKAA1-204ENST00000397128 CFTRP13569 1480 aa8.31□□□□□ -1.08
PRKAA1-204ENST00000397128 GOLGA3Q08378 1498 aa8.31□□□□□ -1.08
PRKAA1-204ENST00000397128 FANCD2Q9BXW9 1451 aa8.3□□□□□ -1.08
PRKAA1-204ENST00000397128 ATP1B4Q9UN42 357 aaPredicted RBP8.28□□□□□ -1.08
PRKAA1-204ENST00000397128 LAMC3Q9Y6N6 1575 aa8.27□□□□□ -1.09
PRKAA1-204ENST00000397128 TRIM26Q12899 539 aaPredicted RBP8.25□□□□□ -1.09
PRKAA1-204ENST00000397128 TNIKQ9UKE5 1360 aa8.24□□□□□ -1.09
PRKAA1-204ENST00000397128 CUX2O14529 1486 aa8.24□□□□□ -1.09
PRKAA1-204ENST00000397128 SOGA1O94964 1423 aa8.22□□□□□ -1.09
PRKAA1-204ENST00000397128 ZEB1P37275 1124 aaPredicted RBP8.22□□□□□ -1.09
PRKAA1-204ENST00000397128 PCGF6Q9BYE7 350 aa8.2□□□□□ -1.1
PRKAA1-204ENST00000397128 TOP2BQ02880 1626 aa8.2□□□□□ -1.1
PRKAA1-204ENST00000397128 FBLN2P98095 1184 aa8.19□□□□□ -1.1
PRKAA1-204ENST00000397128 CLIP1P30622 1438 aa8.18□□□□□ -1.1
PRKAA1-204ENST00000397128 MRC2Q9UBG0 1479 aa8.18□□□□□ -1.1
PRKAA1-204ENST00000397128 CARMIL1Q5VZK9 1371 aa8.18□□□□□ -1.1
PRKAA1-204ENST00000397128 DNMBPQ6XZF7 1577 aa8.18□□□□□ -1.1
PRKAA1-204ENST00000397128 FGD5Q6ZNL6 1462 aa8.17□□□□□ -1.1
PRKAA1-204ENST00000397128 CHMP7Q8WUX9 453 aaPredicted RBP8.17□□□□□ -1.1
PRKAA1-204ENST00000397128 CEP162Q5TB80 1403 aa8.16□□□□□ -1.1
PRKAA1-204ENST00000397128 TTBK1Q5TCY1 1321 aaPredicted RBP8.16□□□□□ -1.1
PRKAA1-204ENST00000397128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.15□□□□□ -1.1
PRKAA1-204ENST00000397128 HNRNPUL2Q1KMD3 747 aaKnown RBP8.15□□□□□ -1.1
PRKAA1-204ENST00000397128 PRDM2Q13029 1718 aa8.15□□□□□ -1.11
PRKAA1-204ENST00000397128 SYNJ1O43426 1573 aa8.15□□□□□ -1.11
PRKAA1-204ENST00000397128 RAPGEF2Q9Y4G8 1499 aa8.14□□□□□ -1.11
PRKAA1-204ENST00000397128 CDK11AQ9UQ88 783 aaPredicted RBP8.14□□□□□ -1.11
PRKAA1-204ENST00000397128 BIVM-ERCC5R4GMW8 1640 aa8.13□□□□□ -1.11
PRKAA1-204ENST00000397128 TOPBP1Q92547 1522 aa8.13□□□□□ -1.11
PRKAA1-204ENST00000397128 CUX1P39880 1505 aa8.12□□□□□ -1.11
PRKAA1-204ENST00000397128 IFT140Q96RY7 1462 aa8.12□□□□□ -1.11
PRKAA1-204ENST00000397128 NESP48681 1621 aa8.12□□□□□ -1.11
PRKAA1-204ENST00000397128 KIF21BO75037 1637 aa8.11□□□□□ -1.11
PRKAA1-204ENST00000397128 FHAD1B1AJZ9 1412 aa8.11□□□□□ -1.11
PRKAA1-204ENST00000397128 ERICH3Q5RHP9 1530 aa8.11□□□□□ -1.11
PRKAA1-204ENST00000397128 GAPVD1Q14C86 1478 aa8.09□□□□□ -1.11
PRKAA1-204ENST00000397128 TDRD9Q8NDG6 1382 aaKnown RBP8.08□□□□□ -1.12
PRKAA1-204ENST00000397128 CCER1Q8TC90 406 aaPredicted RBP8.08□□□□□ -1.12
PRKAA1-204ENST00000397128 ABCA10Q8WWZ4 1543 aa8.07□□□□□ -1.12
PRKAA1-204ENST00000397128 POLA1P09884 1462 aaPredicted RBP8.07□□□□□ -1.12
PRKAA1-204ENST00000397128 GRIN2BQ13224 1484 aa8.06□□□□□ -1.12
PRKAA1-204ENST00000397128 P3H3Q8IVL6 736 aa8.06□□□□□ -1.12
PRKAA1-204ENST00000397128 PPARGC1BQ86YN6 1023 aaKnown RBP8.05□□□□□ -1.12
PRKAA1-204ENST00000397128 CARMIL2Q6F5E8 1435 aa8.05□□□□□ -1.12
PRKAA1-204ENST00000397128 IGF1RP08069 1367 aa8.05□□□□□ -1.12
PRKAA1-204ENST00000397128 RAD54L2Q9Y4B4 1467 aa8.05□□□□□ -1.12
PRKAA1-204ENST00000397128 VPS8Q8N3P4 1428 aa8.04□□□□□ -1.12
PRKAA1-204ENST00000397128 CUL7Q14999 1698 aa8.04□□□□□ -1.12
PRKAA1-204ENST00000397128 FMN1Q68DA7 1419 aa8.04□□□□□ -1.12
PRKAA1-204ENST00000397128 DNAJC5BQ9UF47 199 aa8.03□□□□□ -1.12
PRKAA1-204ENST00000397128 RUSC2Q8N2Y8 1516 aa8.03□□□□□ -1.12
PRKAA1-204ENST00000397128 URB2Q14146 1524 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms