RNA–Protein interactions for RNA: ENST00000612233.1

NOP56-219, Transcript of NOP56 ribonucleoprotein, humanhuman

Gene NOP56, Length 2,980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-219ENST00000612233 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
NOP56-219ENST00000612233 CCDC180Q9P1Z9 1646 aa26.12■■□□□ 1.77
NOP56-219ENST00000612233 ZCCHC6Q5VYS8 1495 aaKnown RBP25.38■■□□□ 1.65
NOP56-219ENST00000612233 DCAF1Q9Y4B6 1507 aa25.1■■□□□ 1.61
NOP56-219ENST00000612233 MYO15BQ96JP2 1530 aa24.61■■□□□ 1.53
NOP56-219ENST00000612233 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
NOP56-219ENST00000612233 NACADO15069 1562 aa24.02■■□□□ 1.44
NOP56-219ENST00000612233 ABCC9O60706 1549 aa23.92■■□□□ 1.42
NOP56-219ENST00000612233 DCAF8L2P0C7V8 631 aa23.68■■□□□ 1.38
NOP56-219ENST00000612233 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.37
NOP56-219ENST00000612233 SCRIBQ14160 1630 aa23.63■■□□□ 1.37
NOP56-219ENST00000612233 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
NOP56-219ENST00000612233 RSF1Q96T23 1441 aaPredicted RBP23.38■■□□□ 1.33
NOP56-219ENST00000612233 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
NOP56-219ENST00000612233 UNC13AQ9UPW8 1703 aa23.16■■□□□ 1.3
NOP56-219ENST00000612233 BAZ1AQ9NRL2 1556 aaPredicted RBP23.13■■□□□ 1.29
NOP56-219ENST00000612233 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
NOP56-219ENST00000612233 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
NOP56-219ENST00000612233 SMARCA4P51532 1647 aa22.92■■□□□ 1.26
NOP56-219ENST00000612233 WIZO95785 1651 aa22.89■■□□□ 1.26
NOP56-219ENST00000612233 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
NOP56-219ENST00000612233 TOP2AP11388 1531 aaKnown RBP22.86■■□□□ 1.25
NOP56-219ENST00000612233 PEG3Q9GZU2 1588 aa22.83■■□□□ 1.25
NOP56-219ENST00000612233 BICRAQ9NZM4 1560 aa22.82■■□□□ 1.24
NOP56-219ENST00000612233 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
NOP56-219ENST00000612233 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
NOP56-219ENST00000612233 CCDC88BA6NC98 1476 aa22.45■■□□□ 1.18
NOP56-219ENST00000612233 MYT1Q01538 1121 aa22.44■■□□□ 1.18
NOP56-219ENST00000612233 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
NOP56-219ENST00000612233 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
NOP56-219ENST00000612233 EEA1Q15075 1411 aa22.26■■□□□ 1.15
NOP56-219ENST00000612233 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
NOP56-219ENST00000612233 SLC24A1O60721 1099 aa22.21■■□□□ 1.15
NOP56-219ENST00000612233 LOC105371045A0A1W2PR82 267 aa22.15■■□□□ 1.14
NOP56-219ENST00000612233 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.13
NOP56-219ENST00000612233 HRCP23327 699 aa22.08■■□□□ 1.13
NOP56-219ENST00000612233 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
NOP56-219ENST00000612233 ABCC8Q09428 1581 aa22.07■■□□□ 1.12
NOP56-219ENST00000612233 TRIM26Q12899 539 aaPredicted RBP22.01■■□□□ 1.11
NOP56-219ENST00000612233 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.111e-6■■□□□ 13.3
NOP56-219ENST00000612233 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
NOP56-219ENST00000612233 BIVM-ERCC5R4GMW8 1640 aa21.97■■□□□ 1.11
NOP56-219ENST00000612233 WRNQ14191 1432 aaPredicted RBP eCLIP21.96■■□□□ 1.11
NOP56-219ENST00000612233 KIF21BO75037 1637 aa21.95■■□□□ 1.1
NOP56-219ENST00000612233 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
NOP56-219ENST00000612233 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
NOP56-219ENST00000612233 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
NOP56-219ENST00000612233 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
NOP56-219ENST00000612233 TTBK1Q5TCY1 1321 aaPredicted RBP21.83■■□□□ 1.08
NOP56-219ENST00000612233 PRKCSHP14314 528 aaPredicted RBP21.82■■□□□ 1.08
NOP56-219ENST00000612233 GOLGA3Q08378 1498 aa21.81■■□□□ 1.08
NOP56-219ENST00000612233 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
NOP56-219ENST00000612233 SOGA1O94964 1423 aa21.76■■□□□ 1.07
NOP56-219ENST00000612233 CFTRP13569 1480 aa21.73■■□□□ 1.07
NOP56-219ENST00000612233 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
NOP56-219ENST00000612233 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
NOP56-219ENST00000612233 CEP162Q5TB80 1403 aa21.68■■□□□ 1.06
NOP56-219ENST00000612233 FAM9AQ8IZU1 332 aaPredicted RBP21.67■■□□□ 1.06
NOP56-219ENST00000612233 ZEB1P37275 1124 aaPredicted RBP21.66■■□□□ 1.06
NOP56-219ENST00000612233 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
NOP56-219ENST00000612233 CUX1P39880 1505 aa21.54■■□□□ 1.04
NOP56-219ENST00000612233 PRXQ9BXM0 1461 aa21.51■■□□□ 1.03
NOP56-219ENST00000612233 CC2D2AQ9P2K1 1620 aa21.46■■□□□ 1.03
NOP56-219ENST00000612233 CADPSQ9ULU8 1353 aa21.4■■□□□ 1.02
NOP56-219ENST00000612233 KIF27Q86VH2 1401 aa21.37■■□□□ 1.01
NOP56-219ENST00000612233 VPS8Q8N3P4 1428 aa21.37■■□□□ 1.01
NOP56-219ENST00000612233 RAPGEF2Q9Y4G8 1499 aa21.36■■□□□ 1.01
NOP56-219ENST00000612233 CLIP1P30622 1438 aa21.35■■□□□ 1.01
NOP56-219ENST00000612233 APLP2Q06481 763 aa21.31■■□□□ 1
NOP56-219ENST00000612233 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
NOP56-219ENST00000612233 DNMBPQ6XZF7 1577 aa21.27■■□□□ 1
NOP56-219ENST00000612233 UBTFP17480 764 aaKnown RBP21.24■□□□□ 0.99
NOP56-219ENST00000612233 ERICH6Q7L0X2 663 aa21.19■□□□□ 0.98
NOP56-219ENST00000612233 MAP3K1Q13233 1512 aa21.17■□□□□ 0.98
NOP56-219ENST00000612233 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
NOP56-219ENST00000612233 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
NOP56-219ENST00000612233 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
NOP56-219ENST00000612233 CUL7Q14999 1698 aa21.15■□□□□ 0.98
NOP56-219ENST00000612233 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.98
NOP56-219ENST00000612233 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
NOP56-219ENST00000612233 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
NOP56-219ENST00000612233 IGF1RP08069 1367 aa21.06■□□□□ 0.96
NOP56-219ENST00000612233 TOPBP1Q92547 1522 aa21.06■□□□□ 0.96
NOP56-219ENST00000612233 PPARGC1BQ86YN6 1023 aaKnown RBP21.06■□□□□ 0.96
NOP56-219ENST00000612233 CUX2O14529 1486 aa21.05■□□□□ 0.96
NOP56-219ENST00000612233 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
NOP56-219ENST00000612233 EFCAB5A4FU69 1503 aa21■□□□□ 0.95
NOP56-219ENST00000612233 CTTNBP2Q8WZ74 1663 aa20.98■□□□□ 0.95
NOP56-219ENST00000612233 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
NOP56-219ENST00000612233 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
NOP56-219ENST00000612233 CFAP43Q8NDM7 1665 aa20.94■□□□□ 0.94
NOP56-219ENST00000612233 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
NOP56-219ENST00000612233 RRBP1Q9P2E9 1410 aaKnown RBP20.93■□□□□ 0.94
NOP56-219ENST00000612233 AQRO60306 1485 aaKnown RBP eCLIP20.91■□□□□ 0.942e-16■■■■□ 24.4
NOP56-219ENST00000612233 PDS5BQ9NTI5 1447 aa20.91■□□□□ 0.94
NOP56-219ENST00000612233 DAXXQ9UER7 740 aaPredicted RBP20.88■□□□□ 0.93
NOP56-219ENST00000612233 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
NOP56-219ENST00000612233 TIAM1Q13009 1591 aa20.88■□□□□ 0.93
NOP56-219ENST00000612233 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
NOP56-219ENST00000612233 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms