Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 ZNF598-201ENST00000561787 786 ntTSL 319.57■□□□□ 0.724e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.684e-6■□□□□ 10.3
GTF2F1P35269 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.29■□□□□ 0.684e-6■□□□□ 10.3
GTF2F1P35269 AGAP3-203ENST00000461065 1707 ntTSL 1 (best)18.09■□□□□ 0.494e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.454e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-214ENST00000490483 861 ntTSL 517.88■□□□□ 0.454e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-215ENST00000490986 977 ntTSL 1 (best)17.88■□□□□ 0.454e-6■□□□□ 10.3
GTF2F1P35269 ZNF598-209ENST00000567625 775 ntTSL 517.87■□□□□ 0.454e-6■□□□□ 10.3
GTF2F1P35269 PLEKHM2-204ENST00000477849 1057 ntTSL 517.69■□□□□ 0.424e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-211ENST00000481257 553 ntTSL 516.95■□□□□ 0.34e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-208ENST00000470859 670 ntTSL 414.96□□□□□ -0.014e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-219ENST00000592353 528 ntTSL 514.96□□□□□ -0.014e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-209ENST00000471323 3326 ntTSL 214.53□□□□□ -0.084e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-203ENST00000392183 1004 ntTSL 1 (best)13.77□□□□□ -0.214e-6■□□□□ 10.3
GTF2F1P35269 IPO13-202ENST00000372343 3894 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.234e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-210ENST00000475223 610 ntTSL 212.82□□□□□ -0.364e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-218ENST00000590666 472 ntTSL 412.02□□□□□ -0.494e-6■□□□□ 10.3
GTF2F1P35269 ALKBH6-206ENST00000466196 556 ntTSL 1 (best)10.59□□□□□ -0.714e-6■□□□□ 10.3
GTF2F1P35269 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21■□□□□ 0.957e-7■□□□□ 10.3
GTF2F1P35269 TMC6-220ENST00000591756 475 ntTSL 220.06■□□□□ 0.87e-7■□□□□ 10.3
GTF2F1P35269 RABGAP1L-209ENST00000457696 1847 ntTSL 1 (best)14.99□□□□□ -0.017e-7■□□□□ 10.3
GTF2F1P35269 ZEB2-233ENST00000636179 8984 ntTSL 513.18□□□□□ -0.37e-7■□□□□ 10.3
GTF2F1P35269 TMC6-217ENST00000590934 386 ntTSL 512.62□□□□□ -0.397e-7■□□□□ 10.3
GTF2F1P35269 RABGAP1L-222ENST00000635248 3074 ntTSL 511.19□□□□□ -0.627e-7■□□□□ 10.3
GTF2F1P35269 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.023e-6■□□□□ 10.3
GTF2F1P35269 AL121845.3-203ENST00000496820 507 ntTSL 525.94■■□□□ 1.743e-6■□□□□ 10.3
GTF2F1P35269 LIME1-203ENST00000465591 680 ntTSL 224.28■■□□□ 1.483e-6■□□□□ 10.3
GTF2F1P35269 LIME1-210ENST00000621325 2410 ntTSL 223.88■■□□□ 1.413e-6■□□□□ 10.3
GTF2F1P35269 AL121845.3-202ENST00000632538 872 ntAPPRIS P1 TSL 322.44■■□□□ 1.183e-6■□□□□ 10.3
GTF2F1P35269 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.093e-6■□□□□ 10.3
GTF2F1P35269 LIME1-202ENST00000444951 451 ntAPPRIS ALT2 TSL 318.69■□□□□ 0.583e-6■□□□□ 10.3
GTF2F1P35269 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.61■□□□□ 0.573e-6■□□□□ 10.3
GTF2F1P35269 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.71e-7■□□□□ 10.3
GTF2F1P35269 NFKBIA-202ENST00000553342 212 ntTSL 522.56■■□□□ 1.25e-8■□□□□ 10.2
GTF2F1P35269 NFKBIA-205ENST00000555629 599 ntTSL 220.95■□□□□ 0.945e-8■□□□□ 10.2
GTF2F1P35269 NFKBIA-207ENST00000557100 825 ntTSL 319.21■□□□□ 0.675e-8■□□□□ 10.2
GTF2F1P35269 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.465e-8■□□□□ 10.2
GTF2F1P35269 NFKBIA-210ENST00000557459 780 ntTSL 217.24■□□□□ 0.355e-8■□□□□ 10.2
GTF2F1P35269 NFKBIA-203ENST00000554001 1396 ntTSL 516.79■□□□□ 0.285e-8■□□□□ 10.2
GTF2F1P35269 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC13.54□□□□□ -0.245e-8■□□□□ 10.2
GTF2F1P35269 EEF1D-208ENST00000524883 828 ntTSL 220.55■□□□□ 0.882e-9■□□□□ 10.2
GTF2F1P35269 EEF1D-222ENST00000528519 553 ntTSL 318.19■□□□□ 0.52e-9■□□□□ 10.2
GTF2F1P35269 EEF1D-214ENST00000526135 535 ntTSL 214.31□□□□□ -0.122e-9■□□□□ 10.2
GTF2F1P35269 ANXA6-213ENST00000522664 451 ntTSL 510.67□□□□□ -0.79e-9■□□□□ 10.2
GTF2F1P35269 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.23■□□□□ 0.673e-8■□□□□ 10.2
GTF2F1P35269 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.163e-8■□□□□ 10.2
GTF2F1P35269 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.043e-8■□□□□ 10.2
GTF2F1P35269 UBAC1-204ENST00000478485 773 ntTSL 226.35■■□□□ 1.819e-11■□□□□ 10.2
GTF2F1P35269 UBAC1-203ENST00000471163 838 ntTSL 318.19■□□□□ 0.59e-11■□□□□ 10.2
GTF2F1P35269 DDAH2-220ENST00000488119 1121 ntTSL 224.4■■□□□ 1.51e-8■□□□□ 10.2
GTF2F1P35269 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.06■■□□□ 1.441e-8■□□□□ 10.2
GTF2F1P35269 LSM14A-207ENST00000589878 559 ntTSL 421.28■■□□□ 11e-8■□□□□ 10.2
GTF2F1P35269 SRRM2-228ENST00000576878 1141 ntTSL 218.82■□□□□ 0.61e-8■□□□□ 10.2
GTF2F1P35269 SRRM2-206ENST00000571041 498 ntTSL 417.11■□□□□ 0.331e-8■□□□□ 10.2
GTF2F1P35269 SRRM2-204ENST00000570705 675 ntTSL 316.69■□□□□ 0.261e-8■□□□□ 10.2
GTF2F1P35269 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.131e-8■□□□□ 10.2
GTF2F1P35269 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.061e-8■□□□□ 10.2
GTF2F1P35269 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.924e-8■□□□□ 10.2
GTF2F1P35269 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.65■■□□□ 1.381e-6■□□□□ 10.2
GTF2F1P35269 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.58■■□□□ 1.371e-6■□□□□ 10.2
GTF2F1P35269 XBP1-205ENST00000482720 520 ntTSL 223.58■■□□□ 1.371e-6■□□□□ 10.2
GTF2F1P35269 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.341e-6■□□□□ 10.2
GTF2F1P35269 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.221e-6■□□□□ 10.2
GTF2F1P35269 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.36■■□□□ 1.171e-6■□□□□ 10.2
GTF2F1P35269 ABHD16A-216ENST00000498420 1137 ntTSL 523.76■■□□□ 1.391e-7■□□□□ 10.1
GTF2F1P35269 ESRRA-205ENST00000468670 742 ntTSL 223.22■■□□□ 1.311e-7■□□□□ 10.1
GTF2F1P35269 ABHD16A-214ENST00000495769 1892 ntTSL 521.5■■□□□ 1.031e-7■□□□□ 10.1
GTF2F1P35269 LRRC75A-AS1-224ENST00000581718 574 ntTSL 220.86■□□□□ 0.931e-7■□□□□ 10.1
GTF2F1P35269 LRRC75A-AS1-203ENST00000472367 794 ntTSL 319.81■□□□□ 0.761e-7■□□□□ 10.1
GTF2F1P35269 ABHD16A-209ENST00000477462 582 ntTSL 319.34■□□□□ 0.691e-7■□□□□ 10.1
GTF2F1P35269 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.661e-7■□□□□ 10.1
GTF2F1P35269 LRRC75A-AS1-212ENST00000483588 688 ntTSL 318.79■□□□□ 0.61e-7■□□□□ 10.1
GTF2F1P35269 LRRC75A-AS1-229ENST00000584177 574 ntTSL 418.42■□□□□ 0.541e-7■□□□□ 10.1
GTF2F1P35269 UBAC1-202ENST00000465873 882 ntTSL 218.08■□□□□ 0.481e-7■□□□□ 10.1
GTF2F1P35269 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.421e-7■□□□□ 10.1
GTF2F1P35269 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.79■□□□□ 0.281e-7■□□□□ 10.1
GTF2F1P35269 ABHD16A-212ENST00000492084 2260 ntTSL 216.37■□□□□ 0.211e-7■□□□□ 10.1
GTF2F1P35269 AC133540.1-201ENST00000620845 1019 ntBASIC15.54■□□□□ 0.081e-7■□□□□ 10.1
GTF2F1P35269 ABHD16A-215ENST00000496579 380 ntTSL 214.83□□□□□ -0.041e-7■□□□□ 10.1
GTF2F1P35269 LRRC75A-AS1-207ENST00000478103 712 ntTSL 311.7□□□□□ -0.541e-7■□□□□ 10.1
GTF2F1P35269 LRRC75A-AS1-227ENST00000583400 712 ntTSL 411.59□□□□□ -0.551e-7■□□□□ 10.1
GTF2F1P35269 LRRC75A-AS1-222ENST00000580770 572 ntTSL 411.4□□□□□ -0.581e-7■□□□□ 10.1
GTF2F1P35269 UBAC1-206ENST00000489050 864 ntTSL 311.27□□□□□ -0.611e-7■□□□□ 10.1
GTF2F1P35269 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC10.93□□□□□ -0.661e-7■□□□□ 10.1
GTF2F1P35269 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC9.14□□□□□ -0.951e-7■□□□□ 10.1
GTF2F1P35269 AGAP3-214ENST00000476375 1019 ntTSL 513.94□□□□□ -0.181e-6■□□□□ 10.1
GTF2F1P35269 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.37■■□□□ 1.171e-8■□□□□ 10.1
GTF2F1P35269 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.721e-8■□□□□ 10.1
GTF2F1P35269 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.151e-8■□□□□ 10.1
GTF2F1P35269 HERC4-212ENST00000505760 578 ntTSL 427.88■■■□□ 2.053e-9■□□□□ 10.1
GTF2F1P35269 HERC4-214ENST00000513996 944 ntTSL 39.73□□□□□ -0.853e-9■□□□□ 10.1
GTF2F1P35269 HERC4-203ENST00000395185 625 ntTSL 49.07□□□□□ -0.963e-9■□□□□ 10.1
GTF2F1P35269 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -13e-9■□□□□ 10.1
GTF2F1P35269 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.87□□□□□ -1.153e-9■□□□□ 10.1
GTF2F1P35269 HERC4-209ENST00000473533 3593 ntTSL 1 (best)7.34□□□□□ -1.233e-9■□□□□ 10.1
GTF2F1P35269 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.44□□□□□ -1.383e-9■□□□□ 10.1
GTF2F1P35269 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.573e-9■□□□□ 10.1
GTF2F1P35269 TRIM28-211ENST00000597968 504 ntTSL 215.31■□□□□ 0.043e-6■□□□□ 10.1
GTF2F1P35269 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC13.31□□□□□ -0.287e-11■□□□□ 10.1
GTF2F1P35269 EXOC3L4-202ENST00000559116 460 ntTSL 518.12■□□□□ 0.497e-9■□□□□ 10.1
Retrieved 100 of 18,214 protein–RNA pairs in 495 ms