RNA–Protein interactions for RNA: ENST00000589878.5

LSM14A-207, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 4

Gene LSM14A, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-207ENST00000589878 NISCHQ9Y2I1 1504 aa46.53■■■■■ 5.04
LSM14A-207ENST00000589878 ABCC9O60706 1549 aa42.51■■■■■ 4.4
LSM14A-207ENST00000589878 CCDC180Q9P1Z9 1646 aa41.91■■■■■ 4.3
LSM14A-207ENST00000589878 DNAJC5BQ9UF47 199 aa40.33■■■■■ 4.05
LSM14A-207ENST00000589878 RB1CC1Q8TDY2 1594 aa40.16■■■■■ 4.02
LSM14A-207ENST00000589878 NACADO15069 1562 aa39.74■■■■□ 3.95
LSM14A-207ENST00000589878 DCAF8L2P0C7V8 631 aa39.71■■■■□ 3.95
LSM14A-207ENST00000589878 PABPN1Q86U42 306 aaKnown RBP eCLIP39.57■■■■□ 3.93
LSM14A-207ENST00000589878 UNC13AQ9UPW8 1703 aa39.32■■■■□ 3.89
LSM14A-207ENST00000589878 BICRAQ9NZM4 1560 aa39.03■■■■□ 3.84
LSM14A-207ENST00000589878 MYO15BQ96JP2 1530 aa38.94■■■■□ 3.82
LSM14A-207ENST00000589878 ZCCHC6Q5VYS8 1495 aaKnown RBP38.42■■■■□ 3.74
LSM14A-207ENST00000589878 CC2D2AQ9P2K1 1620 aa38.34■■■■□ 3.73
LSM14A-207ENST00000589878 CECR2Q9BXF3 1484 aa38.3■■■■□ 3.72
LSM14A-207ENST00000589878 SHROOM4Q9ULL8 1493 aa38.3■■■■□ 3.72
LSM14A-207ENST00000589878 DCAF1Q9Y4B6 1507 aa38.3■■■■□ 3.72
LSM14A-207ENST00000589878 SCRIBQ14160 1630 aa38.28■■■■□ 3.72
LSM14A-207ENST00000589878 EIF4G1Q04637 1599 aaKnown RBP38.1■■■■□ 3.69
LSM14A-207ENST00000589878 DNAJC5Q9H3Z4 198 aa37.32■■■■□ 3.56
LSM14A-207ENST00000589878 ERCC6Q03468 1493 aa36.73■■■■□ 3.47
LSM14A-207ENST00000589878 CUX2O14529 1486 aa36.72■■■■□ 3.47
LSM14A-207ENST00000589878 NCAPD3P42695 1498 aa36.7■■■■□ 3.47
LSM14A-207ENST00000589878 ATAD2BQ9ULI0 1458 aa36.56■■■■□ 3.44
LSM14A-207ENST00000589878 SMARCA4P51532 1647 aa36.41■■■■□ 3.42
LSM14A-207ENST00000589878 SMARCA2P51531 1590 aa36.4■■■■□ 3.42
LSM14A-207ENST00000589878 NESP48681 1621 aa36.39■■■■□ 3.42
LSM14A-207ENST00000589878 HMGXB3Q12766 1538 aa36.36■■■■□ 3.41
LSM14A-207ENST00000589878 BAZ1BQ9UIG0 1483 aaKnown RBP36.19■■■■□ 3.38
LSM14A-207ENST00000589878 BAZ1AQ9NRL2 1556 aaPredicted RBP36.12■■■■□ 3.37
LSM14A-207ENST00000589878 THOC2Q8NI27 1593 aaKnown RBP36.02■■■■□ 3.36
LSM14A-207ENST00000589878 PEG3Q9GZU2 1588 aa35.97■■■■□ 3.35
LSM14A-207ENST00000589878 LAMC3Q9Y6N6 1575 aa35.96■■■■□ 3.35
LSM14A-207ENST00000589878 KIF21AQ7Z4S6 1674 aa35.89■■■■□ 3.34
LSM14A-207ENST00000589878 MROH2BQ7Z745 1585 aa35.89■■■■□ 3.34
LSM14A-207ENST00000589878 PDS5BQ9NTI5 1447 aa35.79■■■■□ 3.32
LSM14A-207ENST00000589878 TRIM41Q8WV44 630 aa35.62■■■■□ 3.29
LSM14A-207ENST00000589878 CADPSQ9ULU8 1353 aa35.6■■■■□ 3.29
LSM14A-207ENST00000589878 MRC2Q9UBG0 1479 aa35.51■■■■□ 3.28
LSM14A-207ENST00000589878 WIZO95785 1651 aa35.47■■■■□ 3.27
LSM14A-207ENST00000589878 WDR62O43379 1518 aa35.41■■■■□ 3.26
LSM14A-207ENST00000589878 CEP164Q9UPV0 1460 aa35.29■■■■□ 3.24
LSM14A-207ENST00000589878 FANCD2Q9BXW9 1451 aa35.22■■■■□ 3.23
LSM14A-207ENST00000589878 CFTRP13569 1480 aa35.07■■■■□ 3.2
LSM14A-207ENST00000589878 OSCARQ8IYS5 282 aa35.06■■■■□ 3.2
LSM14A-207ENST00000589878 URB2Q14146 1524 aaKnown RBP34.96■■■■□ 3.19
LSM14A-207ENST00000589878 RSF1Q96T23 1441 aaPredicted RBP34.95■■■■□ 3.19
LSM14A-207ENST00000589878 TOP2AP11388 1531 aaKnown RBP34.91■■■■□ 3.18
LSM14A-207ENST00000589878 PRDM2Q13029 1718 aa34.69■■■■□ 3.14
LSM14A-207ENST00000589878 RIMBP3CA6NJZ7 1639 aa34.65■■■■□ 3.14
LSM14A-207ENST00000589878 RIMBP3BA6NNM3 1639 aa34.65■■■■□ 3.14
LSM14A-207ENST00000589878 RIMBP3Q9UFD9 1639 aa34.65■■■■□ 3.14
LSM14A-207ENST00000589878 ZNF608Q9ULD9 1512 aaPredicted RBP34.63■■■■□ 3.13
LSM14A-207ENST00000589878 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
LSM14A-207ENST00000589878 CCDC88BA6NC98 1476 aa34.57■■■■□ 3.12
LSM14A-207ENST00000589878 TOPBP1Q92547 1522 aa34.49■■■■□ 3.11
LSM14A-207ENST00000589878 ARHGEF11O15085 1522 aa34.45■■■■□ 3.11
LSM14A-207ENST00000589878 EIF4G3O43432 1585 aaKnown RBP34.38■■■■□ 3.09
LSM14A-207ENST00000589878 ABCC8Q09428 1581 aa34.34■■■■□ 3.09
LSM14A-207ENST00000589878 CYB5RLQ6IPT4 315 aa34.34■■■■□ 3.09
LSM14A-207ENST00000589878 DNMBPQ6XZF7 1577 aa34.3■■■■□ 3.08
LSM14A-207ENST00000589878 AQRO60306 1485 aaKnown RBP eCLIP34.28■■■■□ 3.082e-7■■■■□ 19.4
LSM14A-207ENST00000589878 CHD1O14646 1710 aa34.27■■■■□ 3.08
LSM14A-207ENST00000589878 FBLN2P98095 1184 aa34.24■■■■□ 3.07
LSM14A-207ENST00000589878 TARBP1Q13395 1621 aaKnown RBP34.21■■■■□ 3.07
LSM14A-207ENST00000589878 TRHP20396 242 aaPredicted RBP34.15■■■■□ 3.06
LSM14A-207ENST00000589878 POLA1P09884 1462 aaPredicted RBP34.1■■■■□ 3.05
LSM14A-207ENST00000589878 ARAP1Q96P48 1450 aa34.09■■■■□ 3.05
LSM14A-207ENST00000589878 RAD54L2Q9Y4B4 1467 aa34.05■■■■□ 3.04
LSM14A-207ENST00000589878 TDRD9Q8NDG6 1382 aaKnown RBP34■■■■□ 3.03
LSM14A-207ENST00000589878 SOGA1O94964 1423 aa33.98■■■■□ 3.03
LSM14A-207ENST00000589878 SNAPC4Q5SXM2 1469 aa33.88■■■■□ 3.01
LSM14A-207ENST00000589878 FGD5Q6ZNL6 1462 aa33.84■■■■□ 3.01
LSM14A-207ENST00000589878 CHMP7Q8WUX9 453 aaPredicted RBP33.84■■■■□ 3.01
LSM14A-207ENST00000589878 CLASP1Q7Z460 1538 aa33.79■■■■□ 3
LSM14A-207ENST00000589878 SYNJ1O43426 1573 aa33.74■■■□□ 2.99
LSM14A-207ENST00000589878 CUX1P39880 1505 aa33.74■■■□□ 2.99
LSM14A-207ENST00000589878 WDR97A6NE52 1622 aa33.73■■■□□ 2.99
LSM14A-207ENST00000589878 MAGI1Q96QZ7 1491 aaPredicted RBP33.71■■■□□ 2.99
LSM14A-207ENST00000589878 GRIN2BQ13224 1484 aa33.69■■■□□ 2.98
LSM14A-207ENST00000589878 SYNJ2O15056 1496 aa33.63■■■□□ 2.97
LSM14A-207ENST00000589878 PBRM1Q86U86 1689 aa33.57■■■□□ 2.96
LSM14A-207ENST00000589878 GAPVD1Q14C86 1478 aa33.54■■■□□ 2.96
LSM14A-207ENST00000589878 AEBP2Q6ZN18 517 aaPredicted RBP33.5■■■□□ 2.95
LSM14A-207ENST00000589878 ABCA5Q8WWZ7 1642 aa33.38■■■□□ 2.93
LSM14A-207ENST00000589878 ABCA10Q8WWZ4 1543 aa33.38■■■□□ 2.93
LSM14A-207ENST00000589878 ERCC6L2Q5T890 1561 aa33.31■■■□□ 2.92
LSM14A-207ENST00000589878 GRIN2AQ12879 1464 aa33.26■■■□□ 2.92
LSM14A-207ENST00000589878 SUPT5HO00267 1087 aaKnown RBP33.22■■■□□ 2.91
LSM14A-207ENST00000589878 CEP170Q5SW79 1584 aa33.19■■■□□ 2.9
LSM14A-207ENST00000589878 WRNQ14191 1432 aaPredicted RBP eCLIP33.19■■■□□ 2.9
LSM14A-207ENST00000589878 ADAMTS12P58397 1594 aa33.17■■■□□ 2.9
LSM14A-207ENST00000589878 NUP160Q12769 1436 aa33.14■■■□□ 2.9
LSM14A-207ENST00000589878 FHAD1B1AJZ9 1412 aa33.07■■■□□ 2.88
LSM14A-207ENST00000589878 SHROOM2Q13796 1616 aa33.05■■■□□ 2.88
LSM14A-207ENST00000589878 BIVM-ERCC5R4GMW8 1640 aa33.04■■■□□ 2.88
LSM14A-207ENST00000589878 TOP2BQ02880 1626 aa33.03■■■□□ 2.88
LSM14A-207ENST00000589878 ERICH3Q5RHP9 1530 aa32.94■■■□□ 2.86
LSM14A-207ENST00000589878 KIF13AQ9H1H9 1805 aa32.93■■■□□ 2.86
LSM14A-207ENST00000589878 PRG4Q92954 1404 aaPredicted RBP32.93■■■□□ 2.86
LSM14A-207ENST00000589878 JPH4Q96JJ6 628 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms