RNA–Protein interactions for RNA: ENST00000468670.1

ESRRA-205, Transcript of estrogen related receptor alpha, humanhuman

TSL 2

Gene ESRRA, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-205ENST00000468670 NISCHQ9Y2I1 1504 aa51.35■■■■■ 5.81
ESRRA-205ENST00000468670 ABCC9O60706 1549 aa46.25■■■■■ 4.99
ESRRA-205ENST00000468670 CCDC180Q9P1Z9 1646 aa46.16■■■■■ 4.98
ESRRA-205ENST00000468670 RB1CC1Q8TDY2 1594 aa43.91■■■■■ 4.62
ESRRA-205ENST00000468670 NACADO15069 1562 aa43.57■■■■■ 4.57
ESRRA-205ENST00000468670 DNAJC5BQ9UF47 199 aa43.5■■■■■ 4.55
ESRRA-205ENST00000468670 DCAF8L2P0C7V8 631 aa43.23■■■■■ 4.51
ESRRA-205ENST00000468670 UNC13AQ9UPW8 1703 aa43.21■■■■■ 4.51
ESRRA-205ENST00000468670 PABPN1Q86U42 306 aaKnown RBP eCLIP42.99■■■■■ 4.47
ESRRA-205ENST00000468670 MYO15BQ96JP2 1530 aa42.9■■■■■ 4.46
ESRRA-205ENST00000468670 BICRAQ9NZM4 1560 aa42.81■■■■■ 4.44
ESRRA-205ENST00000468670 ZCCHC6Q5VYS8 1495 aaKnown RBP42.57■■■■■ 4.41
ESRRA-205ENST00000468670 DCAF1Q9Y4B6 1507 aa42.36■■■■■ 4.37
ESRRA-205ENST00000468670 SCRIBQ14160 1630 aa42.11■■■■■ 4.33
ESRRA-205ENST00000468670 SHROOM4Q9ULL8 1493 aa41.97■■■■■ 4.31
ESRRA-205ENST00000468670 CC2D2AQ9P2K1 1620 aa41.81■■■■■ 4.28
ESRRA-205ENST00000468670 EIF4G1Q04637 1599 aaKnown RBP41.67■■■■■ 4.26
ESRRA-205ENST00000468670 CECR2Q9BXF3 1484 aa41.61■■■■■ 4.25
ESRRA-205ENST00000468670 NCAPD3P42695 1498 aa40.21■■■■■ 4.03
ESRRA-205ENST00000468670 SMARCA4P51532 1647 aa40.14■■■■■ 4.02
ESRRA-205ENST00000468670 ATAD2BQ9ULI0 1458 aa40.13■■■■■ 4.02
ESRRA-205ENST00000468670 SMARCA2P51531 1590 aa39.96■■■■□ 3.99
ESRRA-205ENST00000468670 HMGXB3Q12766 1538 aa39.96■■■■□ 3.99
ESRRA-205ENST00000468670 DNAJC5Q9H3Z4 198 aa39.85■■■■□ 3.97
ESRRA-205ENST00000468670 BAZ1AQ9NRL2 1556 aaPredicted RBP39.83■■■■□ 3.97
ESRRA-205ENST00000468670 ERCC6Q03468 1493 aa39.82■■■■□ 3.97
ESRRA-205ENST00000468670 CUX2O14529 1486 aa39.8■■■■□ 3.96
ESRRA-205ENST00000468670 NESP48681 1621 aa39.77■■■■□ 3.96
ESRRA-205ENST00000468670 PEG3Q9GZU2 1588 aa39.71■■■■□ 3.95
ESRRA-205ENST00000468670 BAZ1BQ9UIG0 1483 aaKnown RBP39.7■■■■□ 3.95
ESRRA-205ENST00000468670 MROH2BQ7Z745 1585 aa39.64■■■■□ 3.94
ESRRA-205ENST00000468670 THOC2Q8NI27 1593 aaKnown RBP39.41■■■■□ 3.9
ESRRA-205ENST00000468670 LAMC3Q9Y6N6 1575 aa39.36■■■■□ 3.89
ESRRA-205ENST00000468670 KIF21AQ7Z4S6 1674 aa39.32■■■■□ 3.89
ESRRA-205ENST00000468670 WIZO95785 1651 aa39.22■■■■□ 3.87
ESRRA-205ENST00000468670 PDS5BQ9NTI5 1447 aa39.02■■■■□ 3.84
ESRRA-205ENST00000468670 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
ESRRA-205ENST00000468670 MRC2Q9UBG0 1479 aa38.79■■■■□ 3.8
ESRRA-205ENST00000468670 WDR62O43379 1518 aa38.76■■■■□ 3.8
ESRRA-205ENST00000468670 RSF1Q96T23 1441 aaPredicted RBP38.71■■■■□ 3.79
ESRRA-205ENST00000468670 CEP164Q9UPV0 1460 aa38.61■■■■□ 3.77
ESRRA-205ENST00000468670 TOP2AP11388 1531 aaKnown RBP38.61■■■■□ 3.77
ESRRA-205ENST00000468670 FANCD2Q9BXW9 1451 aa38.58■■■■□ 3.77
ESRRA-205ENST00000468670 CFTRP13569 1480 aa38.54■■■■□ 3.76
ESRRA-205ENST00000468670 URB2Q14146 1524 aaKnown RBP38.35■■■■□ 3.73
ESRRA-205ENST00000468670 PRDM2Q13029 1718 aa38.34■■■■□ 3.73
ESRRA-205ENST00000468670 CCDC88BA6NC98 1476 aa38.15■■■■□ 3.7
ESRRA-205ENST00000468670 TRIM41Q8WV44 630 aa38.09■■■■□ 3.69
ESRRA-205ENST00000468670 ZNF608Q9ULD9 1512 aaPredicted RBP37.91■■■■□ 3.66
ESRRA-205ENST00000468670 TOPBP1Q92547 1522 aa37.88■■■■□ 3.65
ESRRA-205ENST00000468670 OSCARQ8IYS5 282 aa37.85■■■■□ 3.65
ESRRA-205ENST00000468670 IFT140Q96RY7 1462 aa37.81■■■■□ 3.64
ESRRA-205ENST00000468670 DNMBPQ6XZF7 1577 aa37.72■■■■□ 3.63
ESRRA-205ENST00000468670 EIF4G3O43432 1585 aaKnown RBP37.71■■■■□ 3.63
ESRRA-205ENST00000468670 RIMBP3CA6NJZ7 1639 aa37.63■■■■□ 3.61
ESRRA-205ENST00000468670 RIMBP3BA6NNM3 1639 aa37.63■■■■□ 3.61
ESRRA-205ENST00000468670 RIMBP3Q9UFD9 1639 aa37.63■■■■□ 3.61
ESRRA-205ENST00000468670 ABCC8Q09428 1581 aa37.62■■■■□ 3.61
ESRRA-205ENST00000468670 TARBP1Q13395 1621 aaKnown RBP37.61■■■■□ 3.61
ESRRA-205ENST00000468670 CHD1O14646 1710 aa37.51■■■■□ 3.6
ESRRA-205ENST00000468670 POLA1P09884 1462 aaPredicted RBP37.49■■■■□ 3.59
ESRRA-205ENST00000468670 AQRO60306 1485 aaKnown RBP eCLIP37.48■■■■□ 3.593e-7■■■■■ 36.6
ESRRA-205ENST00000468670 ARHGEF11O15085 1522 aa37.45■■■■□ 3.59
ESRRA-205ENST00000468670 RAD54L2Q9Y4B4 1467 aa37.38■■■■□ 3.57
ESRRA-205ENST00000468670 FGD5Q6ZNL6 1462 aa37.25■■■■□ 3.55
ESRRA-205ENST00000468670 CUX1P39880 1505 aa37.25■■■■□ 3.55
ESRRA-205ENST00000468670 SOGA1O94964 1423 aa37.22■■■■□ 3.55
ESRRA-205ENST00000468670 TDRD9Q8NDG6 1382 aaKnown RBP37.21■■■■□ 3.55
ESRRA-205ENST00000468670 FBLN2P98095 1184 aa37.13■■■■□ 3.53
ESRRA-205ENST00000468670 SNAPC4Q5SXM2 1469 aa37.12■■■■□ 3.53
ESRRA-205ENST00000468670 WDR97A6NE52 1622 aa37.11■■■■□ 3.53
ESRRA-205ENST00000468670 ARAP1Q96P48 1450 aa37.1■■■■□ 3.53
ESRRA-205ENST00000468670 CYB5RLQ6IPT4 315 aa37.05■■■■□ 3.52
ESRRA-205ENST00000468670 CLASP1Q7Z460 1538 aa37■■■■□ 3.51
ESRRA-205ENST00000468670 PBRM1Q86U86 1689 aa36.96■■■■□ 3.51
ESRRA-205ENST00000468670 MAGI1Q96QZ7 1491 aaPredicted RBP36.93■■■■□ 3.5
ESRRA-205ENST00000468670 GRIN2BQ13224 1484 aa36.92■■■■□ 3.5
ESRRA-205ENST00000468670 SYNJ1O43426 1573 aa36.86■■■■□ 3.49
ESRRA-205ENST00000468670 SUPT5HO00267 1087 aaKnown RBP36.84■■■■□ 3.49
ESRRA-205ENST00000468670 ABCA5Q8WWZ7 1642 aa36.84■■■■□ 3.49
ESRRA-205ENST00000468670 SYNJ2O15056 1496 aa36.82■■■■□ 3.49
ESRRA-205ENST00000468670 CHMP7Q8WUX9 453 aaPredicted RBP36.8■■■■□ 3.48
ESRRA-205ENST00000468670 GAPVD1Q14C86 1478 aa36.8■■■■□ 3.48
ESRRA-205ENST00000468670 ABCA10Q8WWZ4 1543 aa36.77■■■■□ 3.48
ESRRA-205ENST00000468670 BIVM-ERCC5R4GMW8 1640 aa36.63■■■■□ 3.45
ESRRA-205ENST00000468670 TRHP20396 242 aaPredicted RBP36.61■■■■□ 3.45
ESRRA-205ENST00000468670 TOP2BQ02880 1626 aa36.59■■■■□ 3.45
ESRRA-205ENST00000468670 ADAMTS12P58397 1594 aa36.55■■■■□ 3.44
ESRRA-205ENST00000468670 WRNQ14191 1432 aaPredicted RBP eCLIP36.51■■■■□ 3.44
ESRRA-205ENST00000468670 ERCC6L2Q5T890 1561 aa36.5■■■■□ 3.43
ESRRA-205ENST00000468670 GRIN2AQ12879 1464 aa36.5■■■■□ 3.43
ESRRA-205ENST00000468670 CEP170Q5SW79 1584 aa36.48■■■■□ 3.43
ESRRA-205ENST00000468670 NUP160Q12769 1436 aa36.38■■■■□ 3.41
ESRRA-205ENST00000468670 SHROOM2Q13796 1616 aa36.31■■■■□ 3.4
ESRRA-205ENST00000468670 FHAD1B1AJZ9 1412 aa36.29■■■■□ 3.4
ESRRA-205ENST00000468670 ERICH3Q5RHP9 1530 aa36.29■■■■□ 3.4
ESRRA-205ENST00000468670 RUSC2Q8N2Y8 1516 aa36.05■■■■□ 3.36
ESRRA-205ENST00000468670 PRG4Q92954 1404 aaPredicted RBP36■■■■□ 3.35
ESRRA-205ENST00000468670 KIF13AQ9H1H9 1805 aa35.97■■■■□ 3.35
ESRRA-205ENST00000468670 JPH4Q96JJ6 628 aa35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms