RNA–Protein interactions for RNA: ENST00000591756.1

TMC6-220, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-220ENST00000591756 NISCHQ9Y2I1 1504 aa44.31■■■■■ 4.68
TMC6-220ENST00000591756 CCDC180Q9P1Z9 1646 aa39.56■■■■□ 3.92
TMC6-220ENST00000591756 ABCC9O60706 1549 aa39.33■■■■□ 3.89
TMC6-220ENST00000591756 RB1CC1Q8TDY2 1594 aa37.52■■■■□ 3.6
TMC6-220ENST00000591756 DCAF8L2P0C7V8 631 aa37.36■■■■□ 3.57
TMC6-220ENST00000591756 NACADO15069 1562 aa37.34■■■■□ 3.57
TMC6-220ENST00000591756 MYO15BQ96JP2 1530 aa36.91■■■■□ 3.5
TMC6-220ENST00000591756 ZCCHC6Q5VYS8 1495 aaKnown RBP36.78■■■■□ 3.48
TMC6-220ENST00000591756 PABPN1Q86U42 306 aaKnown RBP eCLIP36.71■■■■□ 3.47
TMC6-220ENST00000591756 UNC13AQ9UPW8 1703 aa36.69■■■■□ 3.46
TMC6-220ENST00000591756 DNAJC5BQ9UF47 199 aa36.63■■■■□ 3.45
TMC6-220ENST00000591756 DCAF1Q9Y4B6 1507 aa36.58■■■■□ 3.45
TMC6-220ENST00000591756 BICRAQ9NZM4 1560 aa36.44■■■■□ 3.42
TMC6-220ENST00000591756 SCRIBQ14160 1630 aa36.14■■■■□ 3.38
TMC6-220ENST00000591756 SHROOM4Q9ULL8 1493 aa35.91■■■■□ 3.34
TMC6-220ENST00000591756 CC2D2AQ9P2K1 1620 aa35.51■■■■□ 3.28
TMC6-220ENST00000591756 EIF4G1Q04637 1599 aaKnown RBP35.51■■■■□ 3.27
TMC6-220ENST00000591756 CECR2Q9BXF3 1484 aa35.37■■■■□ 3.25
TMC6-220ENST00000591756 NCAPD3P42695 1498 aa34.49■■■■□ 3.11
TMC6-220ENST00000591756 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
TMC6-220ENST00000591756 ATAD2BQ9ULI0 1458 aa34.46■■■■□ 3.11
TMC6-220ENST00000591756 BAZ1AQ9NRL2 1556 aaPredicted RBP34.36■■■■□ 3.09
TMC6-220ENST00000591756 SMARCA2P51531 1590 aa34.35■■■■□ 3.09
TMC6-220ENST00000591756 HMGXB3Q12766 1538 aa34.25■■■■□ 3.07
TMC6-220ENST00000591756 MROH2BQ7Z745 1585 aa34.17■■■■□ 3.06
TMC6-220ENST00000591756 BAZ1BQ9UIG0 1483 aaKnown RBP34.14■■■■□ 3.06
TMC6-220ENST00000591756 PEG3Q9GZU2 1588 aa34.12■■■■□ 3.05
TMC6-220ENST00000591756 ERCC6Q03468 1493 aa33.91■■■■□ 3.02
TMC6-220ENST00000591756 NESP48681 1621 aa33.89■■■■□ 3.02
TMC6-220ENST00000591756 WIZO95785 1651 aa33.77■■■■□ 3
TMC6-220ENST00000591756 CUX2O14529 1486 aa33.69■■■□□ 2.98
TMC6-220ENST00000591756 LAMC3Q9Y6N6 1575 aa33.64■■■□□ 2.98
TMC6-220ENST00000591756 RSF1Q96T23 1441 aaPredicted RBP33.59■■■□□ 2.97
TMC6-220ENST00000591756 DNAJC5Q9H3Z4 198 aa33.54■■■□□ 2.96
TMC6-220ENST00000591756 CADPSQ9ULU8 1353 aa33.48■■■□□ 2.95
TMC6-220ENST00000591756 PDS5BQ9NTI5 1447 aa33.45■■■□□ 2.95
TMC6-220ENST00000591756 KIF21AQ7Z4S6 1674 aa33.42■■■□□ 2.94
TMC6-220ENST00000591756 THOC2Q8NI27 1593 aaKnown RBP33.42■■■□□ 2.94
TMC6-220ENST00000591756 TOP2AP11388 1531 aaKnown RBP33.34■■■□□ 2.93
TMC6-220ENST00000591756 CFTRP13569 1480 aa33.15■■■□□ 2.9
TMC6-220ENST00000591756 MRC2Q9UBG0 1479 aa33.15■■■□□ 2.9
TMC6-220ENST00000591756 FANCD2Q9BXW9 1451 aa33.1■■■□□ 2.89
TMC6-220ENST00000591756 CEP164Q9UPV0 1460 aa33.09■■■□□ 2.89
TMC6-220ENST00000591756 WDR62O43379 1518 aa33.04■■■□□ 2.88
TMC6-220ENST00000591756 CCDC88BA6NC98 1476 aa33■■■□□ 2.87
TMC6-220ENST00000591756 PRDM2Q13029 1718 aa32.81■■■□□ 2.84
TMC6-220ENST00000591756 URB2Q14146 1524 aaKnown RBP32.81■■■□□ 2.84
TMC6-220ENST00000591756 TOPBP1Q92547 1522 aa32.51■■■□□ 2.79
TMC6-220ENST00000591756 SUPT5HO00267 1087 aaKnown RBP32.44■■■□□ 2.78
TMC6-220ENST00000591756 ABCC8Q09428 1581 aa32.43■■■□□ 2.78
TMC6-220ENST00000591756 IFT140Q96RY7 1462 aa32.42■■■□□ 2.78
TMC6-220ENST00000591756 DNMBPQ6XZF7 1577 aa32.4■■■□□ 2.78
TMC6-220ENST00000591756 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
TMC6-220ENST00000591756 OSCARQ8IYS5 282 aa32.27■■■□□ 2.76
TMC6-220ENST00000591756 POLA1P09884 1462 aaPredicted RBP32.2■■■□□ 2.75
TMC6-220ENST00000591756 TARBP1Q13395 1621 aaKnown RBP32.18■■■□□ 2.74
TMC6-220ENST00000591756 EIF4G3O43432 1585 aaKnown RBP32.16■■■□□ 2.74
TMC6-220ENST00000591756 AQRO60306 1485 aaKnown RBP eCLIP32.13■■■□□ 2.731e-12■■■□□ 16.4
TMC6-220ENST00000591756 RAD54L2Q9Y4B4 1467 aa32.11■■■□□ 2.73
TMC6-220ENST00000591756 TRIM41Q8WV44 630 aa32.08■■■□□ 2.73
TMC6-220ENST00000591756 SOGA1O94964 1423 aa32.08■■■□□ 2.73
TMC6-220ENST00000591756 CUX1P39880 1505 aa32.07■■■□□ 2.72
TMC6-220ENST00000591756 FGD5Q6ZNL6 1462 aa32.05■■■□□ 2.72
TMC6-220ENST00000591756 TDRD9Q8NDG6 1382 aaKnown RBP31.99■■■□□ 2.71
TMC6-220ENST00000591756 FBLN2P98095 1184 aa31.88■■■□□ 2.69
TMC6-220ENST00000591756 CHD1O14646 1710 aa31.87■■■□□ 2.69
TMC6-220ENST00000591756 WDR97A6NE52 1622 aa31.82■■■□□ 2.68
TMC6-220ENST00000591756 RIMBP3CA6NJZ7 1639 aa31.78■■■□□ 2.68
TMC6-220ENST00000591756 RIMBP3BA6NNM3 1639 aa31.78■■■□□ 2.68
TMC6-220ENST00000591756 RIMBP3Q9UFD9 1639 aa31.78■■■□□ 2.68
TMC6-220ENST00000591756 SNAPC4Q5SXM2 1469 aa31.78■■■□□ 2.68
TMC6-220ENST00000591756 GRIN2BQ13224 1484 aa31.73■■■□□ 2.67
TMC6-220ENST00000591756 ARHGEF11O15085 1522 aa31.72■■■□□ 2.67
TMC6-220ENST00000591756 ABCA10Q8WWZ4 1543 aa31.69■■■□□ 2.66
TMC6-220ENST00000591756 GAPVD1Q14C86 1478 aa31.68■■■□□ 2.66
TMC6-220ENST00000591756 MAGI1Q96QZ7 1491 aaPredicted RBP31.68■■■□□ 2.66
TMC6-220ENST00000591756 WRNQ14191 1432 aaPredicted RBP eCLIP31.67■■■□□ 2.66
TMC6-220ENST00000591756 CHMP7Q8WUX9 453 aaPredicted RBP31.67■■■□□ 2.66
TMC6-220ENST00000591756 SYNJ1O43426 1573 aa31.63■■■□□ 2.65
TMC6-220ENST00000591756 TOP2BQ02880 1626 aa31.63■■■□□ 2.65
TMC6-220ENST00000591756 BIVM-ERCC5R4GMW8 1640 aa31.62■■■□□ 2.65
TMC6-220ENST00000591756 PBRM1Q86U86 1689 aa31.61■■■□□ 2.65
TMC6-220ENST00000591756 ABCA5Q8WWZ7 1642 aa31.6■■■□□ 2.65
TMC6-220ENST00000591756 SYNJ2O15056 1496 aa31.59■■■□□ 2.65
TMC6-220ENST00000591756 CYB5RLQ6IPT4 315 aa31.53■■■□□ 2.64
TMC6-220ENST00000591756 CLASP1Q7Z460 1538 aa31.49■■■□□ 2.63
TMC6-220ENST00000591756 ARAP1Q96P48 1450 aa31.45■■■□□ 2.62
TMC6-220ENST00000591756 ADAMTS12P58397 1594 aa31.34■■■□□ 2.61
TMC6-220ENST00000591756 GRIN2AQ12879 1464 aa31.33■■■□□ 2.61
TMC6-220ENST00000591756 ERICH3Q5RHP9 1530 aa31.29■■■□□ 2.6
TMC6-220ENST00000591756 FHAD1B1AJZ9 1412 aa31.28■■■□□ 2.6
TMC6-220ENST00000591756 NUP160Q12769 1436 aa31.2■■■□□ 2.59
TMC6-220ENST00000591756 CEP170Q5SW79 1584 aa31.2■■■□□ 2.58
TMC6-220ENST00000591756 ERCC6L2Q5T890 1561 aa31.08■■■□□ 2.57
TMC6-220ENST00000591756 TRHP20396 242 aaPredicted RBP31.07■■■□□ 2.56
TMC6-220ENST00000591756 KIF27Q86VH2 1401 aa31.05■■■□□ 2.56
TMC6-220ENST00000591756 IGF1RP08069 1367 aa31.02■■■□□ 2.56
TMC6-220ENST00000591756 SHROOM2Q13796 1616 aa31.01■■■□□ 2.55
TMC6-220ENST00000591756 JPH4Q96JJ6 628 aa30.93■■■□□ 2.54
TMC6-220ENST00000591756 PRG4Q92954 1404 aaPredicted RBP30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms