RNA–Protein interactions for RNA: ENST00000461065.1

AGAP3-203, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best)

Gene AGAP3, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-203ENST00000461065 NISCHQ9Y2I1 1504 aa35.79■■■■□ 3.32
AGAP3-203ENST00000461065 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
AGAP3-203ENST00000461065 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
AGAP3-203ENST00000461065 ABCC9O60706 1549 aa29.92■■■□□ 2.38
AGAP3-203ENST00000461065 DCAF8L2P0C7V8 631 aa29.73■■■□□ 2.35
AGAP3-203ENST00000461065 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
AGAP3-203ENST00000461065 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
AGAP3-203ENST00000461065 NACADO15069 1562 aa29.29■■■□□ 2.28
AGAP3-203ENST00000461065 RB1CC1Q8TDY2 1594 aa29.12■■■□□ 2.25
AGAP3-203ENST00000461065 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
AGAP3-203ENST00000461065 SCRIBQ14160 1630 aa28.75■■■□□ 2.19
AGAP3-203ENST00000461065 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
AGAP3-203ENST00000461065 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.13e-6■■□□□ 13.3
AGAP3-203ENST00000461065 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
AGAP3-203ENST00000461065 CECR2Q9BXF3 1484 aa27.81■■■□□ 2.04
AGAP3-203ENST00000461065 SUPT5HO00267 1087 aaKnown RBP27.77■■■□□ 2.04
AGAP3-203ENST00000461065 BAZ1AQ9NRL2 1556 aaPredicted RBP27.68■■■□□ 2.02
AGAP3-203ENST00000461065 RSF1Q96T23 1441 aaPredicted RBP27.65■■■□□ 2.02
AGAP3-203ENST00000461065 MROH2BQ7Z745 1585 aa27.61■■■□□ 2.01
AGAP3-203ENST00000461065 SMARCA4P51532 1647 aa27.54■■■□□ 2
AGAP3-203ENST00000461065 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.97
AGAP3-203ENST00000461065 WIZO95785 1651 aa27.33■■□□□ 1.97
AGAP3-203ENST00000461065 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
AGAP3-203ENST00000461065 ATAD2BQ9ULI0 1458 aa27.21■■□□□ 1.95
AGAP3-203ENST00000461065 SMARCA2P51531 1590 aa27.2■■□□□ 1.94
AGAP3-203ENST00000461065 TOP2AP11388 1531 aaKnown RBP27.1■■□□□ 1.93
AGAP3-203ENST00000461065 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
AGAP3-203ENST00000461065 NCAPD3P42695 1498 aa27.05■■□□□ 1.92
AGAP3-203ENST00000461065 CC2D2AQ9P2K1 1620 aa27.04■■□□□ 1.92
AGAP3-203ENST00000461065 HMGXB3Q12766 1538 aa26.96■■□□□ 1.91
AGAP3-203ENST00000461065 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.9
AGAP3-203ENST00000461065 CCDC88BA6NC98 1476 aa26.83■■□□□ 1.89
AGAP3-203ENST00000461065 CHIC1Q5VXU3 224 aa26.57■■□□□ 1.84
AGAP3-203ENST00000461065 CFTRP13569 1480 aa26.36■■□□□ 1.81
AGAP3-203ENST00000461065 CADPSQ9ULU8 1353 aa26.35■■□□□ 1.81
AGAP3-203ENST00000461065 TRIM41Q8WV44 630 aa26.17■■□□□ 1.78
AGAP3-203ENST00000461065 LAMC3Q9Y6N6 1575 aa26.17■■□□□ 1.78
AGAP3-203ENST00000461065 NESP48681 1621 aa26.13■■□□□ 1.77
AGAP3-203ENST00000461065 ABCC8Q09428 1581 aa26.11■■□□□ 1.77
AGAP3-203ENST00000461065 PRDM2Q13029 1718 aa26.08■■□□□ 1.77
AGAP3-203ENST00000461065 WRNQ14191 1432 aaPredicted RBP eCLIP26.06■■□□□ 1.76
AGAP3-203ENST00000461065 FANCD2Q9BXW9 1451 aa26.04■■□□□ 1.76
AGAP3-203ENST00000461065 PDS5BQ9NTI5 1447 aa26.03■■□□□ 1.76
AGAP3-203ENST00000461065 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
AGAP3-203ENST00000461065 SYNJ1O43426 1573 aa25.88■■□□□ 1.73
AGAP3-203ENST00000461065 TOP2BQ02880 1626 aa25.84■■□□□ 1.73
AGAP3-203ENST00000461065 CUX1P39880 1505 aa25.84■■□□□ 1.73
AGAP3-203ENST00000461065 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
AGAP3-203ENST00000461065 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
AGAP3-203ENST00000461065 ERCC6Q03468 1493 aa25.74■■□□□ 1.71
AGAP3-203ENST00000461065 DNMBPQ6XZF7 1577 aa25.72■■□□□ 1.71
AGAP3-203ENST00000461065 TOPBP1Q92547 1522 aa25.69■■□□□ 1.7
AGAP3-203ENST00000461065 URB2Q14146 1524 aaKnown RBP25.69■■□□□ 1.7
AGAP3-203ENST00000461065 MRC2Q9UBG0 1479 aa25.67■■□□□ 1.7
AGAP3-203ENST00000461065 FAM9AQ8IZU1 332 aaPredicted RBP25.63■■□□□ 1.69
AGAP3-203ENST00000461065 FGD5Q6ZNL6 1462 aa25.63■■□□□ 1.69
AGAP3-203ENST00000461065 SOGA1O94964 1423 aa25.6■■□□□ 1.69
AGAP3-203ENST00000461065 EEA1Q15075 1411 aa25.57■■□□□ 1.68
AGAP3-203ENST00000461065 LOC105371045A0A1W2PR82 267 aa25.57■■□□□ 1.68
AGAP3-203ENST00000461065 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
AGAP3-203ENST00000461065 WDR62O43379 1518 aa25.52■■□□□ 1.68
AGAP3-203ENST00000461065 THOC2Q8NI27 1593 aaKnown RBP25.49■■□□□ 1.67
AGAP3-203ENST00000461065 RUSC2Q8N2Y8 1516 aa25.48■■□□□ 1.67
AGAP3-203ENST00000461065 CSRNP3Q8WYN3 585 aa25.46■■□□□ 1.67
AGAP3-203ENST00000461065 KIF27Q86VH2 1401 aa25.45■■□□□ 1.67
AGAP3-203ENST00000461065 RAD54L2Q9Y4B4 1467 aa25.45■■□□□ 1.67
AGAP3-203ENST00000461065 CUX2O14529 1486 aa25.42■■□□□ 1.66
AGAP3-203ENST00000461065 ABCA10Q8WWZ4 1543 aa25.41■■□□□ 1.66
AGAP3-203ENST00000461065 IFT140Q96RY7 1462 aa25.33■■□□□ 1.64
AGAP3-203ENST00000461065 TARBP1Q13395 1621 aaKnown RBP25.3■■□□□ 1.64
AGAP3-203ENST00000461065 PCGF6Q9BYE7 350 aa25.3■■□□□ 1.64
AGAP3-203ENST00000461065 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
AGAP3-203ENST00000461065 EHMT2Q96KQ7 1210 aa25.26■■□□□ 1.63
AGAP3-203ENST00000461065 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
AGAP3-203ENST00000461065 HRCP23327 699 aa25.25■■□□□ 1.63
AGAP3-203ENST00000461065 IGF1RP08069 1367 aa25.24■■□□□ 1.63
AGAP3-203ENST00000461065 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
AGAP3-203ENST00000461065 ABCA5Q8WWZ7 1642 aa25.17■■□□□ 1.62
AGAP3-203ENST00000461065 KIF21BO75037 1637 aa25.16■■□□□ 1.62
AGAP3-203ENST00000461065 GOLGA3Q08378 1498 aa25.16■■□□□ 1.62
AGAP3-203ENST00000461065 PRXQ9BXM0 1461 aa25.16■■□□□ 1.62
AGAP3-203ENST00000461065 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.629e-7■■■■□ 24.7
AGAP3-203ENST00000461065 ZNF608Q9ULD9 1512 aaPredicted RBP25.13■■□□□ 1.61
AGAP3-203ENST00000461065 CARMIL1Q5VZK9 1371 aa25.13■■□□□ 1.61
AGAP3-203ENST00000461065 UBTFP17480 764 aaKnown RBP25.12■■□□□ 1.61
AGAP3-203ENST00000461065 ERICH3Q5RHP9 1530 aa25.11■■□□□ 1.61
AGAP3-203ENST00000461065 TRIM26Q12899 539 aaPredicted RBP25.1■■□□□ 1.61
AGAP3-203ENST00000461065 RAPGEF2Q9Y4G8 1499 aa25.1■■□□□ 1.61
AGAP3-203ENST00000461065 GRIN2BQ13224 1484 aa25.07■■□□□ 1.6
AGAP3-203ENST00000461065 TNIKQ9UKE5 1360 aa25.04■■□□□ 1.6
AGAP3-203ENST00000461065 CUL7Q14999 1698 aa25.04■■□□□ 1.6
AGAP3-203ENST00000461065 EIF4G3O43432 1585 aaKnown RBP25.03■■□□□ 1.6
AGAP3-203ENST00000461065 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
AGAP3-203ENST00000461065 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.58
AGAP3-203ENST00000461065 SNAPC4Q5SXM2 1469 aa24.9■■□□□ 1.58
AGAP3-203ENST00000461065 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.57
AGAP3-203ENST00000461065 ADAMTS12P58397 1594 aa24.88■■□□□ 1.57
AGAP3-203ENST00000461065 CEP162Q5TB80 1403 aa24.85■■□□□ 1.57
AGAP3-203ENST00000461065 CHMP7Q8WUX9 453 aaPredicted RBP24.81■■□□□ 1.56
AGAP3-203ENST00000461065 SYNJ2O15056 1496 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms