RNA–Protein interactions for RNA: ENST00000555629.1

NFKBIA-205, Transcript of NFKB inhibitor alpha, humanhuman

TSL 2

Gene NFKBIA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-205ENST00000555629 NISCHQ9Y2I1 1504 aa46.34■■■■■ 5.01
NFKBIA-205ENST00000555629 CCDC180Q9P1Z9 1646 aa41.51■■■■■ 4.23
NFKBIA-205ENST00000555629 ABCC9O60706 1549 aa41.23■■■■■ 4.19
NFKBIA-205ENST00000555629 RB1CC1Q8TDY2 1594 aa39.39■■■■□ 3.9
NFKBIA-205ENST00000555629 NACADO15069 1562 aa39.18■■■■□ 3.86
NFKBIA-205ENST00000555629 DCAF8L2P0C7V8 631 aa39.03■■■■□ 3.84
NFKBIA-205ENST00000555629 MYO15BQ96JP2 1530 aa38.73■■■■□ 3.79
NFKBIA-205ENST00000555629 UNC13AQ9UPW8 1703 aa38.49■■■■□ 3.75
NFKBIA-205ENST00000555629 ZCCHC6Q5VYS8 1495 aaKnown RBP38.45■■■■□ 3.75
NFKBIA-205ENST00000555629 DNAJC5BQ9UF47 199 aa38.44■■■■□ 3.74
NFKBIA-205ENST00000555629 PABPN1Q86U42 306 aaKnown RBP eCLIP38.42■■■■□ 3.74
NFKBIA-205ENST00000555629 DCAF1Q9Y4B6 1507 aa38.32■■■■□ 3.72
NFKBIA-205ENST00000555629 BICRAQ9NZM4 1560 aa38.19■■■■□ 3.7
NFKBIA-205ENST00000555629 SCRIBQ14160 1630 aa37.8■■■■□ 3.64
NFKBIA-205ENST00000555629 SHROOM4Q9ULL8 1493 aa37.76■■■■□ 3.63
NFKBIA-205ENST00000555629 CC2D2AQ9P2K1 1620 aa37.28■■■■□ 3.56
NFKBIA-205ENST00000555629 EIF4G1Q04637 1599 aaKnown RBP37.25■■■■□ 3.55
NFKBIA-205ENST00000555629 CECR2Q9BXF3 1484 aa37.13■■■■□ 3.53
NFKBIA-205ENST00000555629 NCAPD3P42695 1498 aa36.16■■■■□ 3.38
NFKBIA-205ENST00000555629 SMARCA4P51532 1647 aa36.1■■■■□ 3.37
NFKBIA-205ENST00000555629 ATAD2BQ9ULI0 1458 aa36.07■■■■□ 3.37
NFKBIA-205ENST00000555629 SMARCA2P51531 1590 aa36.01■■■■□ 3.35
NFKBIA-205ENST00000555629 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
NFKBIA-205ENST00000555629 HMGXB3Q12766 1538 aa35.91■■■■□ 3.34
NFKBIA-205ENST00000555629 PEG3Q9GZU2 1588 aa35.76■■■■□ 3.31
NFKBIA-205ENST00000555629 BAZ1BQ9UIG0 1483 aaKnown RBP35.74■■■■□ 3.31
NFKBIA-205ENST00000555629 MROH2BQ7Z745 1585 aa35.69■■■■□ 3.3
NFKBIA-205ENST00000555629 ERCC6Q03468 1493 aa35.61■■■■□ 3.29
NFKBIA-205ENST00000555629 NESP48681 1621 aa35.48■■■■□ 3.27
NFKBIA-205ENST00000555629 CUX2O14529 1486 aa35.48■■■■□ 3.27
NFKBIA-205ENST00000555629 LAMC3Q9Y6N6 1575 aa35.33■■■■□ 3.25
NFKBIA-205ENST00000555629 WIZO95785 1651 aa35.29■■■■□ 3.24
NFKBIA-205ENST00000555629 DNAJC5Q9H3Z4 198 aa35.17■■■■□ 3.22
NFKBIA-205ENST00000555629 PDS5BQ9NTI5 1447 aa35.12■■■■□ 3.21
NFKBIA-205ENST00000555629 THOC2Q8NI27 1593 aaKnown RBP35.08■■■■□ 3.21
NFKBIA-205ENST00000555629 CADPSQ9ULU8 1353 aa35.08■■■■□ 3.21
NFKBIA-205ENST00000555629 KIF21AQ7Z4S6 1674 aa35.05■■■■□ 3.2
NFKBIA-205ENST00000555629 RSF1Q96T23 1441 aaPredicted RBP35.05■■■■□ 3.2
NFKBIA-205ENST00000555629 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
NFKBIA-205ENST00000555629 MRC2Q9UBG0 1479 aa34.77■■■■□ 3.16
NFKBIA-205ENST00000555629 CFTRP13569 1480 aa34.71■■■■□ 3.15
NFKBIA-205ENST00000555629 CEP164Q9UPV0 1460 aa34.7■■■■□ 3.15
NFKBIA-205ENST00000555629 WDR62O43379 1518 aa34.67■■■■□ 3.14
NFKBIA-205ENST00000555629 FANCD2Q9BXW9 1451 aa34.66■■■■□ 3.14
NFKBIA-205ENST00000555629 CCDC88BA6NC98 1476 aa34.46■■■■□ 3.11
NFKBIA-205ENST00000555629 PRDM2Q13029 1718 aa34.43■■■■□ 3.1
NFKBIA-205ENST00000555629 URB2Q14146 1524 aaKnown RBP34.35■■■■□ 3.09
NFKBIA-205ENST00000555629 TOPBP1Q92547 1522 aa34.04■■■■□ 3.04
NFKBIA-205ENST00000555629 ABCC8Q09428 1581 aa34.02■■■■□ 3.04
NFKBIA-205ENST00000555629 IFT140Q96RY7 1462 aa33.99■■■■□ 3.03
NFKBIA-205ENST00000555629 DNMBPQ6XZF7 1577 aa33.94■■■■□ 3.02
NFKBIA-205ENST00000555629 OSCARQ8IYS5 282 aa33.91■■■■□ 3.02
NFKBIA-205ENST00000555629 ZNF608Q9ULD9 1512 aaPredicted RBP33.88■■■■□ 3.01
NFKBIA-205ENST00000555629 EIF4G3O43432 1585 aaKnown RBP33.72■■■□□ 2.99
NFKBIA-205ENST00000555629 TRIM41Q8WV44 630 aa33.72■■■□□ 2.99
NFKBIA-205ENST00000555629 TARBP1Q13395 1621 aaKnown RBP33.71■■■□□ 2.99
NFKBIA-205ENST00000555629 POLA1P09884 1462 aaPredicted RBP33.69■■■□□ 2.98
NFKBIA-205ENST00000555629 SUPT5HO00267 1087 aaKnown RBP33.69■■■□□ 2.98
NFKBIA-205ENST00000555629 AQRO60306 1485 aaKnown RBP eCLIP33.62■■■□□ 2.971e-11■■■■□ 24.6
NFKBIA-205ENST00000555629 SOGA1O94964 1423 aa33.57■■■□□ 2.96
NFKBIA-205ENST00000555629 RAD54L2Q9Y4B4 1467 aa33.56■■■□□ 2.96
NFKBIA-205ENST00000555629 CUX1P39880 1505 aa33.53■■■□□ 2.96
NFKBIA-205ENST00000555629 FGD5Q6ZNL6 1462 aa33.52■■■□□ 2.96
NFKBIA-205ENST00000555629 TDRD9Q8NDG6 1382 aaKnown RBP33.45■■■□□ 2.94
NFKBIA-205ENST00000555629 CHD1O14646 1710 aa33.44■■■□□ 2.94
NFKBIA-205ENST00000555629 WDR97A6NE52 1622 aa33.43■■■□□ 2.94
NFKBIA-205ENST00000555629 RIMBP3CA6NJZ7 1639 aa33.41■■■□□ 2.94
NFKBIA-205ENST00000555629 RIMBP3BA6NNM3 1639 aa33.41■■■□□ 2.94
NFKBIA-205ENST00000555629 RIMBP3Q9UFD9 1639 aa33.41■■■□□ 2.94
NFKBIA-205ENST00000555629 FBLN2P98095 1184 aa33.37■■■□□ 2.93
NFKBIA-205ENST00000555629 ARHGEF11O15085 1522 aa33.33■■■□□ 2.93
NFKBIA-205ENST00000555629 SNAPC4Q5SXM2 1469 aa33.29■■■□□ 2.92
NFKBIA-205ENST00000555629 GRIN2BQ13224 1484 aa33.25■■■□□ 2.91
NFKBIA-205ENST00000555629 MAGI1Q96QZ7 1491 aaPredicted RBP33.23■■■□□ 2.91
NFKBIA-205ENST00000555629 CHMP7Q8WUX9 453 aaPredicted RBP33.18■■■□□ 2.9
NFKBIA-205ENST00000555629 GAPVD1Q14C86 1478 aa33.17■■■□□ 2.9
NFKBIA-205ENST00000555629 ABCA10Q8WWZ4 1543 aa33.17■■■□□ 2.9
NFKBIA-205ENST00000555629 PBRM1Q86U86 1689 aa33.14■■■□□ 2.9
NFKBIA-205ENST00000555629 SYNJ2O15056 1496 aa33.11■■■□□ 2.89
NFKBIA-205ENST00000555629 WRNQ14191 1432 aaPredicted RBP eCLIP33.09■■■□□ 2.89
NFKBIA-205ENST00000555629 ABCA5Q8WWZ7 1642 aa33.09■■■□□ 2.89
NFKBIA-205ENST00000555629 SYNJ1O43426 1573 aa33.09■■■□□ 2.89
NFKBIA-205ENST00000555629 CYB5RLQ6IPT4 315 aa33.08■■■□□ 2.89
NFKBIA-205ENST00000555629 BIVM-ERCC5R4GMW8 1640 aa33.08■■■□□ 2.89
NFKBIA-205ENST00000555629 TOP2BQ02880 1626 aa33.07■■■□□ 2.88
NFKBIA-205ENST00000555629 CLASP1Q7Z460 1538 aa33.05■■■□□ 2.88
NFKBIA-205ENST00000555629 ARAP1Q96P48 1450 aa33■■■□□ 2.87
NFKBIA-205ENST00000555629 ADAMTS12P58397 1594 aa32.83■■■□□ 2.85
NFKBIA-205ENST00000555629 GRIN2AQ12879 1464 aa32.81■■■□□ 2.84
NFKBIA-205ENST00000555629 ERICH3Q5RHP9 1530 aa32.77■■■□□ 2.84
NFKBIA-205ENST00000555629 FHAD1B1AJZ9 1412 aa32.76■■■□□ 2.83
NFKBIA-205ENST00000555629 NUP160Q12769 1436 aa32.69■■■□□ 2.82
NFKBIA-205ENST00000555629 CEP170Q5SW79 1584 aa32.67■■■□□ 2.82
NFKBIA-205ENST00000555629 TRHP20396 242 aaPredicted RBP32.65■■■□□ 2.82
NFKBIA-205ENST00000555629 ERCC6L2Q5T890 1561 aa32.53■■■□□ 2.8
NFKBIA-205ENST00000555629 SHROOM2Q13796 1616 aa32.52■■■□□ 2.8
NFKBIA-205ENST00000555629 KIF27Q86VH2 1401 aa32.45■■■□□ 2.79
NFKBIA-205ENST00000555629 JPH4Q96JJ6 628 aa32.39■■■□□ 2.78
NFKBIA-205ENST00000555629 IGF1RP08069 1367 aa32.39■■■□□ 2.78
NFKBIA-205ENST00000555629 PRG4Q92954 1404 aaPredicted RBP32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 334.7 ms