RNA–Protein interactions for RNA: ENST00000557140.5

NFKBIA-208, Transcript of NFKB inhibitor alpha, humanhuman

TSL 5 BASIC

Gene NFKBIA, Length 1,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-208ENST00000557140 NISCHQ9Y2I1 1504 aa29.84■■■□□ 2.37
NFKBIA-208ENST00000557140 CCDC180Q9P1Z9 1646 aa26.77■■□□□ 1.88
NFKBIA-208ENST00000557140 ABCC9O60706 1549 aa26.58■■□□□ 1.85
NFKBIA-208ENST00000557140 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.66
NFKBIA-208ENST00000557140 DCAF8L2P0C7V8 631 aa25.22■■□□□ 1.63
NFKBIA-208ENST00000557140 NACADO15069 1562 aa25.22■■□□□ 1.63
NFKBIA-208ENST00000557140 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
NFKBIA-208ENST00000557140 UNC13AQ9UPW8 1703 aa24.83■■□□□ 1.57
NFKBIA-208ENST00000557140 ZCCHC6Q5VYS8 1495 aaKnown RBP24.77■■□□□ 1.56
NFKBIA-208ENST00000557140 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
NFKBIA-208ENST00000557140 DCAF1Q9Y4B6 1507 aa24.63■■□□□ 1.53
NFKBIA-208ENST00000557140 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
NFKBIA-208ENST00000557140 BICRAQ9NZM4 1560 aa24.55■■□□□ 1.52
NFKBIA-208ENST00000557140 SCRIBQ14160 1630 aa24.44■■□□□ 1.5
NFKBIA-208ENST00000557140 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
NFKBIA-208ENST00000557140 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
NFKBIA-208ENST00000557140 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
NFKBIA-208ENST00000557140 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
NFKBIA-208ENST00000557140 SMARCA4P51532 1647 aa23.29■■□□□ 1.32
NFKBIA-208ENST00000557140 NCAPD3P42695 1498 aa23.23■■□□□ 1.31
NFKBIA-208ENST00000557140 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
NFKBIA-208ENST00000557140 BAZ1AQ9NRL2 1556 aaPredicted RBP23.21■■□□□ 1.31
NFKBIA-208ENST00000557140 ATAD2BQ9ULI0 1458 aa23.2■■□□□ 1.3
NFKBIA-208ENST00000557140 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
NFKBIA-208ENST00000557140 BAZ1BQ9UIG0 1483 aaKnown RBP23.07■■□□□ 1.28
NFKBIA-208ENST00000557140 ERCC6Q03468 1493 aa23■■□□□ 1.27
NFKBIA-208ENST00000557140 MROH2BQ7Z745 1585 aa23■■□□□ 1.27
NFKBIA-208ENST00000557140 PEG3Q9GZU2 1588 aa23■■□□□ 1.27
NFKBIA-208ENST00000557140 NESP48681 1621 aa22.85■■□□□ 1.25
NFKBIA-208ENST00000557140 CUX2O14529 1486 aa22.81■■□□□ 1.24
NFKBIA-208ENST00000557140 WIZO95785 1651 aa22.78■■□□□ 1.24
NFKBIA-208ENST00000557140 LAMC3Q9Y6N6 1575 aa22.75■■□□□ 1.23
NFKBIA-208ENST00000557140 KIF21AQ7Z4S6 1674 aa22.64■■□□□ 1.21
NFKBIA-208ENST00000557140 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
NFKBIA-208ENST00000557140 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
NFKBIA-208ENST00000557140 RSF1Q96T23 1441 aaPredicted RBP22.56■■□□□ 1.2
NFKBIA-208ENST00000557140 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
NFKBIA-208ENST00000557140 DNAJC5Q9H3Z4 198 aa22.52■■□□□ 1.2
NFKBIA-208ENST00000557140 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
NFKBIA-208ENST00000557140 MRC2Q9UBG0 1479 aa22.41■■□□□ 1.18
NFKBIA-208ENST00000557140 CEP164Q9UPV0 1460 aa22.38■■□□□ 1.17
NFKBIA-208ENST00000557140 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
NFKBIA-208ENST00000557140 CFTRP13569 1480 aa22.33■■□□□ 1.16
NFKBIA-208ENST00000557140 WDR62O43379 1518 aa22.32■■□□□ 1.16
NFKBIA-208ENST00000557140 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
NFKBIA-208ENST00000557140 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
NFKBIA-208ENST00000557140 CCDC88BA6NC98 1476 aa22.2■■□□□ 1.15
NFKBIA-208ENST00000557140 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
NFKBIA-208ENST00000557140 TOPBP1Q92547 1522 aa21.93■■□□□ 1.1
NFKBIA-208ENST00000557140 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
NFKBIA-208ENST00000557140 DNMBPQ6XZF7 1577 aa21.9■■□□□ 1.1
NFKBIA-208ENST00000557140 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
NFKBIA-208ENST00000557140 SUPT5HO00267 1087 aaKnown RBP21.81■■□□□ 1.08
NFKBIA-208ENST00000557140 ZNF608Q9ULD9 1512 aaPredicted RBP21.81■■□□□ 1.08
NFKBIA-208ENST00000557140 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
NFKBIA-208ENST00000557140 EIF4G3O43432 1585 aaKnown RBP21.77■■□□□ 1.08
NFKBIA-208ENST00000557140 TRIM41Q8WV44 630 aa21.74■■□□□ 1.07
NFKBIA-208ENST00000557140 TARBP1Q13395 1621 aaKnown RBP21.71■■□□□ 1.07
NFKBIA-208ENST00000557140 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
NFKBIA-208ENST00000557140 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.063e-7■■■■□ 23.9
NFKBIA-208ENST00000557140 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
NFKBIA-208ENST00000557140 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
NFKBIA-208ENST00000557140 SOGA1O94964 1423 aa21.62■■□□□ 1.05
NFKBIA-208ENST00000557140 CHD1O14646 1710 aa21.61■■□□□ 1.05
NFKBIA-208ENST00000557140 CUX1P39880 1505 aa21.6■■□□□ 1.05
NFKBIA-208ENST00000557140 FBLN2P98095 1184 aa21.56■■□□□ 1.04
NFKBIA-208ENST00000557140 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
NFKBIA-208ENST00000557140 TDRD9Q8NDG6 1382 aaKnown RBP21.55■■□□□ 1.04
NFKBIA-208ENST00000557140 WDR97A6NE52 1622 aa21.53■■□□□ 1.04
NFKBIA-208ENST00000557140 RIMBP3CA6NJZ7 1639 aa21.52■■□□□ 1.04
NFKBIA-208ENST00000557140 RIMBP3BA6NNM3 1639 aa21.52■■□□□ 1.04
NFKBIA-208ENST00000557140 RIMBP3Q9UFD9 1639 aa21.52■■□□□ 1.04
NFKBIA-208ENST00000557140 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
NFKBIA-208ENST00000557140 ARHGEF11O15085 1522 aa21.45■■□□□ 1.03
NFKBIA-208ENST00000557140 PBRM1Q86U86 1689 aa21.43■■□□□ 1.02
NFKBIA-208ENST00000557140 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
NFKBIA-208ENST00000557140 MAGI1Q96QZ7 1491 aaPredicted RBP21.41■■□□□ 1.02
NFKBIA-208ENST00000557140 CHMP7Q8WUX9 453 aaPredicted RBP21.39■■□□□ 1.02
NFKBIA-208ENST00000557140 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
NFKBIA-208ENST00000557140 ABCA10Q8WWZ4 1543 aa21.36■■□□□ 1.01
NFKBIA-208ENST00000557140 SYNJ1O43426 1573 aa21.35■■□□□ 1.01
NFKBIA-208ENST00000557140 BIVM-ERCC5R4GMW8 1640 aa21.35■■□□□ 1.01
NFKBIA-208ENST00000557140 WRNQ14191 1432 aaPredicted RBP eCLIP21.34■■□□□ 1.01
NFKBIA-208ENST00000557140 TOP2BQ02880 1626 aa21.34■■□□□ 1.01
NFKBIA-208ENST00000557140 ABCA5Q8WWZ7 1642 aa21.34■■□□□ 1.01
NFKBIA-208ENST00000557140 SYNJ2O15056 1496 aa21.33■■□□□ 1.01
NFKBIA-208ENST00000557140 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
NFKBIA-208ENST00000557140 CLASP1Q7Z460 1538 aa21.27■■□□□ 1
NFKBIA-208ENST00000557140 ARAP1Q96P48 1450 aa21.24■□□□□ 0.99
NFKBIA-208ENST00000557140 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
NFKBIA-208ENST00000557140 GRIN2AQ12879 1464 aa21.15■□□□□ 0.98
NFKBIA-208ENST00000557140 ERICH3Q5RHP9 1530 aa21.12■□□□□ 0.97
NFKBIA-208ENST00000557140 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
NFKBIA-208ENST00000557140 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
NFKBIA-208ENST00000557140 TRHP20396 242 aaPredicted RBP21.06■□□□□ 0.96
NFKBIA-208ENST00000557140 NUP160Q12769 1436 aa21.02■□□□□ 0.96
NFKBIA-208ENST00000557140 ERCC6L2Q5T890 1561 aa20.95■□□□□ 0.94
NFKBIA-208ENST00000557140 SHROOM2Q13796 1616 aa20.94■□□□□ 0.94
NFKBIA-208ENST00000557140 KIF27Q86VH2 1401 aa20.93■□□□□ 0.94
NFKBIA-208ENST00000557140 CUL7Q14999 1698 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms