RNA–Protein interactions for RNA: ENST00000461287.1

AL662899.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL662899.1, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL662899.1-201ENST00000461287 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
AL662899.1-201ENST00000461287 CCDC180Q9P1Z9 1646 aa27.65■■■□□ 2.02
AL662899.1-201ENST00000461287 ZCCHC6Q5VYS8 1495 aaKnown RBP26.56■■□□□ 1.84
AL662899.1-201ENST00000461287 DCAF1Q9Y4B6 1507 aa26.21■■□□□ 1.79
AL662899.1-201ENST00000461287 ABCC9O60706 1549 aa26.12■■□□□ 1.77
AL662899.1-201ENST00000461287 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
AL662899.1-201ENST00000461287 PELP1Q8IZL8 1130 aaKnown RBP26■■□□□ 1.75
AL662899.1-201ENST00000461287 MYO15BQ96JP2 1530 aa25.95■■□□□ 1.74
AL662899.1-201ENST00000461287 NACADO15069 1562 aa25.76■■□□□ 1.71
AL662899.1-201ENST00000461287 MYT1Q01538 1121 aa25.62■■□□□ 1.69
AL662899.1-201ENST00000461287 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
AL662899.1-201ENST00000461287 RB1CC1Q8TDY2 1594 aa25.54■■□□□ 1.68
AL662899.1-201ENST00000461287 SCRIBQ14160 1630 aa25.33■■□□□ 1.64
AL662899.1-201ENST00000461287 UNC13AQ9UPW8 1703 aa25.05■■□□□ 1.6
AL662899.1-201ENST00000461287 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
AL662899.1-201ENST00000461287 TTBK1Q5TCY1 1321 aaPredicted RBP24.67■■□□□ 1.54
AL662899.1-201ENST00000461287 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
AL662899.1-201ENST00000461287 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
AL662899.1-201ENST00000461287 CECR2Q9BXF3 1484 aa24.55■■□□□ 1.52
AL662899.1-201ENST00000461287 RSF1Q96T23 1441 aaPredicted RBP24.49■■□□□ 1.51
AL662899.1-201ENST00000461287 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
AL662899.1-201ENST00000461287 MROH2BQ7Z745 1585 aa24.41■■□□□ 1.5
AL662899.1-201ENST00000461287 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
AL662899.1-201ENST00000461287 WIZO95785 1651 aa24.2■■□□□ 1.46
AL662899.1-201ENST00000461287 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.45
AL662899.1-201ENST00000461287 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
AL662899.1-201ENST00000461287 HRCP23327 699 aa24■■□□□ 1.43
AL662899.1-201ENST00000461287 PRKCSHP14314 528 aaPredicted RBP23.97■■□□□ 1.43
AL662899.1-201ENST00000461287 TOP2AP11388 1531 aaKnown RBP23.97■■□□□ 1.43
AL662899.1-201ENST00000461287 ATAD2BQ9ULI0 1458 aa23.95■■□□□ 1.42
AL662899.1-201ENST00000461287 SMARCA2P51531 1590 aa23.94■■□□□ 1.42
AL662899.1-201ENST00000461287 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.41
AL662899.1-201ENST00000461287 NCAPD3P42695 1498 aa23.78■■□□□ 1.4
AL662899.1-201ENST00000461287 BAZ1BQ9UIG0 1483 aaKnown RBP23.78■■□□□ 1.4
AL662899.1-201ENST00000461287 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
AL662899.1-201ENST00000461287 CCDC88BA6NC98 1476 aa23.71■■□□□ 1.39
AL662899.1-201ENST00000461287 CC2D2AQ9P2K1 1620 aa23.69■■□□□ 1.38
AL662899.1-201ENST00000461287 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
AL662899.1-201ENST00000461287 ERICH6Q7L0X2 663 aa23.54■■□□□ 1.36
AL662899.1-201ENST00000461287 APLP2Q06481 763 aa23.48■■□□□ 1.35
AL662899.1-201ENST00000461287 BCL11AQ9H165 835 aa23.42■■□□□ 1.34
AL662899.1-201ENST00000461287 SLC24A1O60721 1099 aa23.22■■□□□ 1.31
AL662899.1-201ENST00000461287 CFTRP13569 1480 aa23.22■■□□□ 1.31
AL662899.1-201ENST00000461287 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
AL662899.1-201ENST00000461287 PPARGC1BQ86YN6 1023 aaKnown RBP23.17■■□□□ 1.3
AL662899.1-201ENST00000461287 DNAJC5BQ9UF47 199 aa23.15■■□□□ 1.3
AL662899.1-201ENST00000461287 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
AL662899.1-201ENST00000461287 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.29
AL662899.1-201ENST00000461287 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
AL662899.1-201ENST00000461287 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
AL662899.1-201ENST00000461287 WRNQ14191 1432 aaPredicted RBP eCLIP23.03■■□□□ 1.28
AL662899.1-201ENST00000461287 LAMC3Q9Y6N6 1575 aa22.97■■□□□ 1.27
AL662899.1-201ENST00000461287 LOC105371045A0A1W2PR82 267 aa22.96■■□□□ 1.27
AL662899.1-201ENST00000461287 SYNJ1O43426 1573 aa22.95■■□□□ 1.26
AL662899.1-201ENST00000461287 NESP48681 1621 aa22.93■■□□□ 1.26
AL662899.1-201ENST00000461287 PCGF6Q9BYE7 350 aa22.91■■□□□ 1.26
AL662899.1-201ENST00000461287 TOP2BQ02880 1626 aa22.89■■□□□ 1.25
AL662899.1-201ENST00000461287 BIVM-ERCC5R4GMW8 1640 aa22.88■■□□□ 1.25
AL662899.1-201ENST00000461287 FANCD2Q9BXW9 1451 aa22.86■■□□□ 1.25
AL662899.1-201ENST00000461287 CUX1P39880 1505 aa22.83■■□□□ 1.25
AL662899.1-201ENST00000461287 PDS5BQ9NTI5 1447 aa22.77■■□□□ 1.24
AL662899.1-201ENST00000461287 CENPBP07199 599 aaPredicted RBP22.77■■□□□ 1.24
AL662899.1-201ENST00000461287 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
AL662899.1-201ENST00000461287 SOGA1O94964 1423 aa22.71■■□□□ 1.23
AL662899.1-201ENST00000461287 EEA1Q15075 1411 aa22.68■■□□□ 1.22
AL662899.1-201ENST00000461287 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
AL662899.1-201ENST00000461287 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
AL662899.1-201ENST00000461287 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
AL662899.1-201ENST00000461287 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
AL662899.1-201ENST00000461287 TOPBP1Q92547 1522 aa22.62■■□□□ 1.21
AL662899.1-201ENST00000461287 URB2Q14146 1524 aaKnown RBP22.59■■□□□ 1.21
AL662899.1-201ENST00000461287 FGD5Q6ZNL6 1462 aa22.58■■□□□ 1.2
AL662899.1-201ENST00000461287 ACIN1Q9UKV3 1341 aaKnown RBP22.55■■□□□ 1.2
AL662899.1-201ENST00000461287 CSRNP3Q8WYN3 585 aa22.54■■□□□ 1.2
AL662899.1-201ENST00000461287 POLA1P09884 1462 aaPredicted RBP22.5■■□□□ 1.19
AL662899.1-201ENST00000461287 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
AL662899.1-201ENST00000461287 KIF27Q86VH2 1401 aa22.46■■□□□ 1.19
AL662899.1-201ENST00000461287 ABCA10Q8WWZ4 1543 aa22.42■■□□□ 1.18
AL662899.1-201ENST00000461287 CUX2O14529 1486 aa22.4■■□□□ 1.18
AL662899.1-201ENST00000461287 KIF21BO75037 1637 aa22.4■■□□□ 1.18
AL662899.1-201ENST00000461287 RAD54L2Q9Y4B4 1467 aa22.4■■□□□ 1.18
AL662899.1-201ENST00000461287 WDR62O43379 1518 aa22.4■■□□□ 1.18
AL662899.1-201ENST00000461287 ERCC6Q03468 1493 aa22.39■■□□□ 1.18
AL662899.1-201ENST00000461287 DAXXQ9UER7 740 aaPredicted RBP22.39■■□□□ 1.17
AL662899.1-201ENST00000461287 WDR97A6NE52 1622 aa22.36■■□□□ 1.17
AL662899.1-201ENST00000461287 GTF3C3Q9Y5Q9 886 aa22.36■■□□□ 1.17
AL662899.1-201ENST00000461287 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
AL662899.1-201ENST00000461287 GOLGA3Q08378 1498 aa22.33■■□□□ 1.17
AL662899.1-201ENST00000461287 PRXQ9BXM0 1461 aa22.32■■□□□ 1.16
AL662899.1-201ENST00000461287 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
AL662899.1-201ENST00000461287 EHMT2Q96KQ7 1210 aa22.31■■□□□ 1.16
AL662899.1-201ENST00000461287 NEUROD1Q13562 356 aa22.3■■□□□ 1.16
AL662899.1-201ENST00000461287 IGF1RP08069 1367 aa22.29■■□□□ 1.16
AL662899.1-201ENST00000461287 ZEB1P37275 1124 aaPredicted RBP22.29■■□□□ 1.16
AL662899.1-201ENST00000461287 ANP32EQ9BTT0 268 aa22.29■■□□□ 1.16
AL662899.1-201ENST00000461287 TNIKQ9UKE5 1360 aa22.27■■□□□ 1.16
AL662899.1-201ENST00000461287 ERICH3Q5RHP9 1530 aa22.27■■□□□ 1.16
AL662899.1-201ENST00000461287 RAPGEF2Q9Y4G8 1499 aa22.25■■□□□ 1.15
AL662899.1-201ENST00000461287 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
AL662899.1-201ENST00000461287 IFT140Q96RY7 1462 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms