RNA–Protein interactions for RNA: ENST00000473572.2

AC002116.1-201, humanhuman

TSL 2 BASIC

Gene AC002116.1, Length 1,130 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002116.1-201ENST00000473572 NISCHQ9Y2I1 1504 aa42.45■■■■■ 4.39
AC002116.1-201ENST00000473572 ABCC9O60706 1549 aa38.83■■■■□ 3.81
AC002116.1-201ENST00000473572 CCDC180Q9P1Z9 1646 aa38.39■■■■□ 3.74
AC002116.1-201ENST00000473572 DNAJC5BQ9UF47 199 aa36.85■■■■□ 3.49
AC002116.1-201ENST00000473572 RB1CC1Q8TDY2 1594 aa36.77■■■■□ 3.48
AC002116.1-201ENST00000473572 NACADO15069 1562 aa36.38■■■■□ 3.41
AC002116.1-201ENST00000473572 PABPN1Q86U42 306 aaKnown RBP eCLIP36.02■■■■□ 3.36
AC002116.1-201ENST00000473572 UNC13AQ9UPW8 1703 aa36.01■■■■□ 3.36
AC002116.1-201ENST00000473572 DCAF8L2P0C7V8 631 aa36■■■■□ 3.35
AC002116.1-201ENST00000473572 BICRAQ9NZM4 1560 aa35.71■■■■□ 3.31
AC002116.1-201ENST00000473572 MYO15BQ96JP2 1530 aa35.69■■■■□ 3.3
AC002116.1-201ENST00000473572 SHROOM4Q9ULL8 1493 aa35.18■■■■□ 3.22
AC002116.1-201ENST00000473572 CC2D2AQ9P2K1 1620 aa35.09■■■■□ 3.21
AC002116.1-201ENST00000473572 ZCCHC6Q5VYS8 1495 aaKnown RBP35.07■■■■□ 3.2
AC002116.1-201ENST00000473572 DCAF1Q9Y4B6 1507 aa35.05■■■■□ 3.2
AC002116.1-201ENST00000473572 CECR2Q9BXF3 1484 aa35.04■■■■□ 3.2
AC002116.1-201ENST00000473572 SCRIBQ14160 1630 aa34.91■■■■□ 3.18
AC002116.1-201ENST00000473572 EIF4G1Q04637 1599 aaKnown RBP34.87■■■■□ 3.17
AC002116.1-201ENST00000473572 DNAJC5Q9H3Z4 198 aa34.25■■■■□ 3.07
AC002116.1-201ENST00000473572 CUX2O14529 1486 aa33.7■■■□□ 2.99
AC002116.1-201ENST00000473572 ERCC6Q03468 1493 aa33.57■■■□□ 2.97
AC002116.1-201ENST00000473572 NCAPD3P42695 1498 aa33.56■■■□□ 2.96
AC002116.1-201ENST00000473572 ATAD2BQ9ULI0 1458 aa33.38■■■□□ 2.93
AC002116.1-201ENST00000473572 SMARCA2P51531 1590 aa33.3■■■□□ 2.92
AC002116.1-201ENST00000473572 HMGXB3Q12766 1538 aa33.29■■■□□ 2.92
AC002116.1-201ENST00000473572 SMARCA4P51532 1647 aa33.25■■■□□ 2.91
AC002116.1-201ENST00000473572 NESP48681 1621 aa33.2■■■□□ 2.91
AC002116.1-201ENST00000473572 BAZ1BQ9UIG0 1483 aaKnown RBP33.05■■■□□ 2.88
AC002116.1-201ENST00000473572 THOC2Q8NI27 1593 aaKnown RBP33.02■■■□□ 2.88
AC002116.1-201ENST00000473572 BAZ1AQ9NRL2 1556 aaPredicted RBP33■■■□□ 2.87
AC002116.1-201ENST00000473572 PEG3Q9GZU2 1588 aa32.93■■■□□ 2.86
AC002116.1-201ENST00000473572 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
AC002116.1-201ENST00000473572 KIF21AQ7Z4S6 1674 aa32.84■■■□□ 2.85
AC002116.1-201ENST00000473572 PDS5BQ9NTI5 1447 aa32.71■■■□□ 2.83
AC002116.1-201ENST00000473572 MROH2BQ7Z745 1585 aa32.7■■■□□ 2.82
AC002116.1-201ENST00000473572 TRIM41Q8WV44 630 aa32.52■■■□□ 2.8
AC002116.1-201ENST00000473572 CADPSQ9ULU8 1353 aa32.5■■■□□ 2.79
AC002116.1-201ENST00000473572 MRC2Q9UBG0 1479 aa32.48■■■□□ 2.79
AC002116.1-201ENST00000473572 WDR62O43379 1518 aa32.44■■■□□ 2.78
AC002116.1-201ENST00000473572 WIZO95785 1651 aa32.31■■■□□ 2.76
AC002116.1-201ENST00000473572 CEP164Q9UPV0 1460 aa32.25■■■□□ 2.75
AC002116.1-201ENST00000473572 FANCD2Q9BXW9 1451 aa32.16■■■□□ 2.74
AC002116.1-201ENST00000473572 OSCARQ8IYS5 282 aa32.04■■■□□ 2.72
AC002116.1-201ENST00000473572 CFTRP13569 1480 aa32.03■■■□□ 2.72
AC002116.1-201ENST00000473572 URB2Q14146 1524 aaKnown RBP31.93■■■□□ 2.7
AC002116.1-201ENST00000473572 TOP2AP11388 1531 aaKnown RBP31.85■■■□□ 2.69
AC002116.1-201ENST00000473572 RSF1Q96T23 1441 aaPredicted RBP31.81■■■□□ 2.68
AC002116.1-201ENST00000473572 PRDM2Q13029 1718 aa31.8■■■□□ 2.68
AC002116.1-201ENST00000473572 RIMBP3CA6NJZ7 1639 aa31.75■■■□□ 2.67
AC002116.1-201ENST00000473572 RIMBP3BA6NNM3 1639 aa31.75■■■□□ 2.67
AC002116.1-201ENST00000473572 RIMBP3Q9UFD9 1639 aa31.75■■■□□ 2.67
AC002116.1-201ENST00000473572 ZNF608Q9ULD9 1512 aaPredicted RBP31.61■■■□□ 2.65
AC002116.1-201ENST00000473572 IFT140Q96RY7 1462 aa31.61■■■□□ 2.65
AC002116.1-201ENST00000473572 ARHGEF11O15085 1522 aa31.56■■■□□ 2.64
AC002116.1-201ENST00000473572 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
AC002116.1-201ENST00000473572 CCDC88BA6NC98 1476 aa31.46■■■□□ 2.63
AC002116.1-201ENST00000473572 EIF4G3O43432 1585 aaKnown RBP31.46■■■□□ 2.63
AC002116.1-201ENST00000473572 ABCC8Q09428 1581 aa31.4■■■□□ 2.62
AC002116.1-201ENST00000473572 CHD1O14646 1710 aa31.36■■■□□ 2.61
AC002116.1-201ENST00000473572 DNMBPQ6XZF7 1577 aa31.34■■■□□ 2.61
AC002116.1-201ENST00000473572 CYB5RLQ6IPT4 315 aa31.32■■■□□ 2.6
AC002116.1-201ENST00000473572 TARBP1Q13395 1621 aaKnown RBP31.28■■■□□ 2.6
AC002116.1-201ENST00000473572 AQRO60306 1485 aaKnown RBP eCLIP31.24■■■□□ 2.594e-8■■■■■ 31.9
AC002116.1-201ENST00000473572 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
AC002116.1-201ENST00000473572 TRHP20396 242 aaPredicted RBP31.14■■■□□ 2.58
AC002116.1-201ENST00000473572 FBLN2P98095 1184 aa31.13■■■□□ 2.57
AC002116.1-201ENST00000473572 POLA1P09884 1462 aaPredicted RBP31.13■■■□□ 2.57
AC002116.1-201ENST00000473572 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.56
AC002116.1-201ENST00000473572 TDRD9Q8NDG6 1382 aaKnown RBP30.96■■■□□ 2.55
AC002116.1-201ENST00000473572 SOGA1O94964 1423 aa30.96■■■□□ 2.55
AC002116.1-201ENST00000473572 WDR97A6NE52 1622 aa30.94■■■□□ 2.54
AC002116.1-201ENST00000473572 CLASP1Q7Z460 1538 aa30.93■■■□□ 2.54
AC002116.1-201ENST00000473572 SNAPC4Q5SXM2 1469 aa30.93■■■□□ 2.54
AC002116.1-201ENST00000473572 SYNJ1O43426 1573 aa30.88■■■□□ 2.53
AC002116.1-201ENST00000473572 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
AC002116.1-201ENST00000473572 MAGI1Q96QZ7 1491 aaPredicted RBP30.83■■■□□ 2.53
AC002116.1-201ENST00000473572 CHMP7Q8WUX9 453 aaPredicted RBP30.82■■■□□ 2.52
AC002116.1-201ENST00000473572 GRIN2BQ13224 1484 aa30.76■■■□□ 2.52
AC002116.1-201ENST00000473572 CUX1P39880 1505 aa30.76■■■□□ 2.51
AC002116.1-201ENST00000473572 SYNJ2O15056 1496 aa30.74■■■□□ 2.51
AC002116.1-201ENST00000473572 PBRM1Q86U86 1689 aa30.69■■■□□ 2.5
AC002116.1-201ENST00000473572 AEBP2Q6ZN18 517 aaPredicted RBP30.63■■■□□ 2.49
AC002116.1-201ENST00000473572 GAPVD1Q14C86 1478 aa30.62■■■□□ 2.49
AC002116.1-201ENST00000473572 ABCA5Q8WWZ7 1642 aa30.52■■■□□ 2.48
AC002116.1-201ENST00000473572 ABCA10Q8WWZ4 1543 aa30.48■■■□□ 2.47
AC002116.1-201ENST00000473572 ERCC6L2Q5T890 1561 aa30.4■■■□□ 2.46
AC002116.1-201ENST00000473572 GRIN2AQ12879 1464 aa30.38■■■□□ 2.45
AC002116.1-201ENST00000473572 ADAMTS12P58397 1594 aa30.32■■■□□ 2.45
AC002116.1-201ENST00000473572 CEP170Q5SW79 1584 aa30.32■■■□□ 2.45
AC002116.1-201ENST00000473572 NUP160Q12769 1436 aa30.3■■■□□ 2.44
AC002116.1-201ENST00000473572 SHROOM2Q13796 1616 aa30.27■■■□□ 2.44
AC002116.1-201ENST00000473572 WRNQ14191 1432 aaPredicted RBP eCLIP30.24■■■□□ 2.43
AC002116.1-201ENST00000473572 KIF13AQ9H1H9 1805 aa30.19■■■□□ 2.42
AC002116.1-201ENST00000473572 FHAD1B1AJZ9 1412 aa30.17■■■□□ 2.42
AC002116.1-201ENST00000473572 BIVM-ERCC5R4GMW8 1640 aa30.17■■■□□ 2.42
AC002116.1-201ENST00000473572 TOP2BQ02880 1626 aa30.14■■■□□ 2.42
AC002116.1-201ENST00000473572 ERICH3Q5RHP9 1530 aa30.11■■■□□ 2.41
AC002116.1-201ENST00000473572 PRG4Q92954 1404 aaPredicted RBP30.04■■■□□ 2.4
AC002116.1-201ENST00000473572 SUPT5HO00267 1087 aaKnown RBP29.97■■■□□ 2.39
AC002116.1-201ENST00000473572 JPH4Q96JJ6 628 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms