RNA–Protein interactions for RNA: ENST00000554001.5

NFKBIA-203, Transcript of NFKB inhibitor alpha, humanhuman

TSL 5

Gene NFKBIA, Length 1,396 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-203ENST00000554001 NISCHQ9Y2I1 1504 aa36.97■■■■□ 3.51
NFKBIA-203ENST00000554001 ABCC9O60706 1549 aa33.13■■■□□ 2.89
NFKBIA-203ENST00000554001 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
NFKBIA-203ENST00000554001 RB1CC1Q8TDY2 1594 aa31.41■■■□□ 2.62
NFKBIA-203ENST00000554001 DCAF8L2P0C7V8 631 aa31.28■■■□□ 2.6
NFKBIA-203ENST00000554001 DNAJC5BQ9UF47 199 aa31.25■■■□□ 2.59
NFKBIA-203ENST00000554001 NACADO15069 1562 aa31.23■■■□□ 2.59
NFKBIA-203ENST00000554001 PABPN1Q86U42 306 aaKnown RBP eCLIP30.97■■■□□ 2.55
NFKBIA-203ENST00000554001 MYO15BQ96JP2 1530 aa30.82■■■□□ 2.53
NFKBIA-203ENST00000554001 UNC13AQ9UPW8 1703 aa30.75■■■□□ 2.51
NFKBIA-203ENST00000554001 BICRAQ9NZM4 1560 aa30.65■■■□□ 2.5
NFKBIA-203ENST00000554001 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
NFKBIA-203ENST00000554001 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
NFKBIA-203ENST00000554001 SCRIBQ14160 1630 aa30.17■■■□□ 2.42
NFKBIA-203ENST00000554001 SHROOM4Q9ULL8 1493 aa30.03■■■□□ 2.4
NFKBIA-203ENST00000554001 CC2D2AQ9P2K1 1620 aa29.88■■■□□ 2.37
NFKBIA-203ENST00000554001 EIF4G1Q04637 1599 aaKnown RBP29.82■■■□□ 2.36
NFKBIA-203ENST00000554001 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
NFKBIA-203ENST00000554001 NCAPD3P42695 1498 aa28.94■■■□□ 2.22
NFKBIA-203ENST00000554001 ATAD2BQ9ULI0 1458 aa28.87■■■□□ 2.21
NFKBIA-203ENST00000554001 SMARCA4P51532 1647 aa28.77■■■□□ 2.2
NFKBIA-203ENST00000554001 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
NFKBIA-203ENST00000554001 HMGXB3Q12766 1538 aa28.62■■■□□ 2.17
NFKBIA-203ENST00000554001 BAZ1AQ9NRL2 1556 aaPredicted RBP28.61■■■□□ 2.17
NFKBIA-203ENST00000554001 MROH2BQ7Z745 1585 aa28.55■■■□□ 2.16
NFKBIA-203ENST00000554001 NESP48681 1621 aa28.53■■■□□ 2.16
NFKBIA-203ENST00000554001 DNAJC5Q9H3Z4 198 aa28.52■■■□□ 2.16
NFKBIA-203ENST00000554001 BAZ1BQ9UIG0 1483 aaKnown RBP28.51■■■□□ 2.15
NFKBIA-203ENST00000554001 ERCC6Q03468 1493 aa28.49■■■□□ 2.15
NFKBIA-203ENST00000554001 PEG3Q9GZU2 1588 aa28.49■■■□□ 2.15
NFKBIA-203ENST00000554001 CUX2O14529 1486 aa28.42■■■□□ 2.14
NFKBIA-203ENST00000554001 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
NFKBIA-203ENST00000554001 WIZO95785 1651 aa28.16■■■□□ 2.1
NFKBIA-203ENST00000554001 THOC2Q8NI27 1593 aaKnown RBP28.1■■■□□ 2.09
NFKBIA-203ENST00000554001 CADPSQ9ULU8 1353 aa28.07■■■□□ 2.08
NFKBIA-203ENST00000554001 PDS5BQ9NTI5 1447 aa28.04■■■□□ 2.08
NFKBIA-203ENST00000554001 KIF21AQ7Z4S6 1674 aa28.02■■■□□ 2.08
NFKBIA-203ENST00000554001 RSF1Q96T23 1441 aaPredicted RBP27.99■■■□□ 2.07
NFKBIA-203ENST00000554001 MRC2Q9UBG0 1479 aa27.8■■■□□ 2.04
NFKBIA-203ENST00000554001 CFTRP13569 1480 aa27.75■■■□□ 2.03
NFKBIA-203ENST00000554001 TOP2AP11388 1531 aaKnown RBP27.74■■■□□ 2.03
NFKBIA-203ENST00000554001 WDR62O43379 1518 aa27.72■■■□□ 2.03
NFKBIA-203ENST00000554001 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
NFKBIA-203ENST00000554001 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
NFKBIA-203ENST00000554001 CCDC88BA6NC98 1476 aa27.54■■■□□ 2
NFKBIA-203ENST00000554001 URB2Q14146 1524 aaKnown RBP27.53■■■□□ 2
NFKBIA-203ENST00000554001 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
NFKBIA-203ENST00000554001 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
NFKBIA-203ENST00000554001 OSCARQ8IYS5 282 aa27.25■■□□□ 1.95
NFKBIA-203ENST00000554001 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
NFKBIA-203ENST00000554001 TOPBP1Q92547 1522 aa27.2■■□□□ 1.95
NFKBIA-203ENST00000554001 IFT140Q96RY7 1462 aa27.14■■□□□ 1.94
NFKBIA-203ENST00000554001 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
NFKBIA-203ENST00000554001 DNMBPQ6XZF7 1577 aa27.05■■□□□ 1.92
NFKBIA-203ENST00000554001 AQRO60306 1485 aaKnown RBP eCLIP26.99■■□□□ 1.913e-7■■■■□ 23.9
NFKBIA-203ENST00000554001 TARBP1Q13395 1621 aaKnown RBP26.96■■□□□ 1.91
NFKBIA-203ENST00000554001 POLA1P09884 1462 aaPredicted RBP26.94■■□□□ 1.9
NFKBIA-203ENST00000554001 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
NFKBIA-203ENST00000554001 RAD54L2Q9Y4B4 1467 aa26.91■■□□□ 1.9
NFKBIA-203ENST00000554001 SOGA1O94964 1423 aa26.84■■□□□ 1.89
NFKBIA-203ENST00000554001 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
NFKBIA-203ENST00000554001 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.88
NFKBIA-203ENST00000554001 RIMBP3CA6NJZ7 1639 aa26.82■■□□□ 1.88
NFKBIA-203ENST00000554001 RIMBP3BA6NNM3 1639 aa26.82■■□□□ 1.88
NFKBIA-203ENST00000554001 RIMBP3Q9UFD9 1639 aa26.82■■□□□ 1.88
NFKBIA-203ENST00000554001 CUX1P39880 1505 aa26.79■■□□□ 1.88
NFKBIA-203ENST00000554001 FGD5Q6ZNL6 1462 aa26.76■■□□□ 1.87
NFKBIA-203ENST00000554001 FBLN2P98095 1184 aa26.76■■□□□ 1.87
NFKBIA-203ENST00000554001 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
NFKBIA-203ENST00000554001 CHD1O14646 1710 aa26.7■■□□□ 1.87
NFKBIA-203ENST00000554001 CYB5RLQ6IPT4 315 aa26.66■■□□□ 1.86
NFKBIA-203ENST00000554001 SNAPC4Q5SXM2 1469 aa26.62■■□□□ 1.85
NFKBIA-203ENST00000554001 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
NFKBIA-203ENST00000554001 GRIN2BQ13224 1484 aa26.54■■□□□ 1.84
NFKBIA-203ENST00000554001 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
NFKBIA-203ENST00000554001 WDR97A6NE52 1622 aa26.52■■□□□ 1.84
NFKBIA-203ENST00000554001 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
NFKBIA-203ENST00000554001 GAPVD1Q14C86 1478 aa26.47■■□□□ 1.83
NFKBIA-203ENST00000554001 CLASP1Q7Z460 1538 aa26.45■■□□□ 1.83
NFKBIA-203ENST00000554001 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
NFKBIA-203ENST00000554001 SYNJ2O15056 1496 aa26.44■■□□□ 1.82
NFKBIA-203ENST00000554001 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
NFKBIA-203ENST00000554001 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
NFKBIA-203ENST00000554001 SYNJ1O43426 1573 aa26.36■■□□□ 1.81
NFKBIA-203ENST00000554001 WRNQ14191 1432 aaPredicted RBP eCLIP26.35■■□□□ 1.81
NFKBIA-203ENST00000554001 TOP2BQ02880 1626 aa26.29■■□□□ 1.8
NFKBIA-203ENST00000554001 TRHP20396 242 aaPredicted RBP26.27■■□□□ 1.8
NFKBIA-203ENST00000554001 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.8
NFKBIA-203ENST00000554001 GRIN2AQ12879 1464 aa26.2■■□□□ 1.79
NFKBIA-203ENST00000554001 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
NFKBIA-203ENST00000554001 ERCC6L2Q5T890 1561 aa26.15■■□□□ 1.78
NFKBIA-203ENST00000554001 NUP160Q12769 1436 aa26.14■■□□□ 1.78
NFKBIA-203ENST00000554001 CEP170Q5SW79 1584 aa26.13■■□□□ 1.77
NFKBIA-203ENST00000554001 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
NFKBIA-203ENST00000554001 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
NFKBIA-203ENST00000554001 SHROOM2Q13796 1616 aa25.97■■□□□ 1.75
NFKBIA-203ENST00000554001 JPH4Q96JJ6 628 aa25.95■■□□□ 1.75
NFKBIA-203ENST00000554001 IGF1RP08069 1367 aa25.92■■□□□ 1.74
NFKBIA-203ENST00000554001 PRG4Q92954 1404 aaPredicted RBP25.9■■□□□ 1.74
NFKBIA-203ENST00000554001 KIF27Q86VH2 1401 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms