Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
NSUN3Q9H649 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.58■■□□□ 1.69
NSUN3Q9H649 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
NSUN3Q9H649 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.57■■□□□ 1.68
NSUN3Q9H649 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NSUN3Q9H649 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NSUN3Q9H649 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
NSUN3Q9H649 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NSUN3Q9H649 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.56■■□□□ 1.68
NSUN3Q9H649 MIR3621-201ENST00000580529 85 ntBASIC25.56■■□□□ 1.68
NSUN3Q9H649 AC010997.5-201ENST00000609182 354 ntBASIC25.56■■□□□ 1.68
NSUN3Q9H649 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.56■■□□□ 1.68
NSUN3Q9H649 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NSUN3Q9H649 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
NSUN3Q9H649 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
NSUN3Q9H649 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NSUN3Q9H649 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.55■■□□□ 1.68
NSUN3Q9H649 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NSUN3Q9H649 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
NSUN3Q9H649 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NSUN3Q9H649 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NSUN3Q9H649 AC096631.2-201ENST00000436136 790 ntBASIC25.54■■□□□ 1.68
NSUN3Q9H649 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
NSUN3Q9H649 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NSUN3Q9H649 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NSUN3Q9H649 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.53■■□□□ 1.68
NSUN3Q9H649 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.53■■□□□ 1.68
NSUN3Q9H649 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.53■■□□□ 1.68
NSUN3Q9H649 MIR6724-1-201ENST00000616420 92 ntBASIC25.53■■□□□ 1.68
NSUN3Q9H649 MIR6724-2-201ENST00000616483 92 ntBASIC25.53■■□□□ 1.68
NSUN3Q9H649 MIR6724-4-201ENST00000617390 92 ntBASIC25.53■■□□□ 1.68
NSUN3Q9H649 MIR6724-3-201ENST00000622482 92 ntBASIC25.53■■□□□ 1.68
NSUN3Q9H649 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NSUN3Q9H649 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
NSUN3Q9H649 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.52■■□□□ 1.68
NSUN3Q9H649 MIR4281-201ENST00000580852 62 ntBASIC25.52■■□□□ 1.68
NSUN3Q9H649 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NSUN3Q9H649 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.52■■□□□ 1.68
NSUN3Q9H649 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.51■■□□□ 1.67
NSUN3Q9H649 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
NSUN3Q9H649 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NSUN3Q9H649 AL356740.2-201ENST00000601559 647 ntBASIC25.51■■□□□ 1.67
NSUN3Q9H649 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NSUN3Q9H649 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NSUN3Q9H649 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
NSUN3Q9H649 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.5■■□□□ 1.67
NSUN3Q9H649 MTDHP2-201ENST00000601468 714 ntBASIC25.5■■□□□ 1.67
NSUN3Q9H649 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
NSUN3Q9H649 AC133561.4-201ENST00000566112 224 ntBASIC25.49■■□□□ 1.67
NSUN3Q9H649 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
NSUN3Q9H649 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
NSUN3Q9H649 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
NSUN3Q9H649 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NSUN3Q9H649 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NSUN3Q9H649 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
NSUN3Q9H649 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.48■■□□□ 1.67
NSUN3Q9H649 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NSUN3Q9H649 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
NSUN3Q9H649 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.47■■□□□ 1.67
NSUN3Q9H649 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.47■■□□□ 1.67
NSUN3Q9H649 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.47■■□□□ 1.67
NSUN3Q9H649 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
NSUN3Q9H649 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
NSUN3Q9H649 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.47■■□□□ 1.67
NSUN3Q9H649 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.46■■□□□ 1.67
NSUN3Q9H649 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
NSUN3Q9H649 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.46■■□□□ 1.67
NSUN3Q9H649 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.46■■□□□ 1.67
NSUN3Q9H649 MIR4466-201ENST00000606121 54 ntBASIC25.46■■□□□ 1.67
NSUN3Q9H649 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
NSUN3Q9H649 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
NSUN3Q9H649 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NSUN3Q9H649 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
NSUN3Q9H649 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NSUN3Q9H649 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.45■■□□□ 1.66
NSUN3Q9H649 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.45■■□□□ 1.66
NSUN3Q9H649 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
NSUN3Q9H649 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
NSUN3Q9H649 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
NSUN3Q9H649 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.44■■□□□ 1.66
NSUN3Q9H649 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
NSUN3Q9H649 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NSUN3Q9H649 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
NSUN3Q9H649 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NSUN3Q9H649 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.43■■□□□ 1.66
NSUN3Q9H649 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.43■■□□□ 1.66
NSUN3Q9H649 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.43■■□□□ 1.66
NSUN3Q9H649 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.42■■□□□ 1.66
NSUN3Q9H649 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.42■■□□□ 1.66
NSUN3Q9H649 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
NSUN3Q9H649 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.42■■□□□ 1.66
NSUN3Q9H649 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
NSUN3Q9H649 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
NSUN3Q9H649 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
NSUN3Q9H649 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
NSUN3Q9H649 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.41■■□□□ 1.66
NSUN3Q9H649 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.41■■□□□ 1.66
NSUN3Q9H649 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.41■■□□□ 1.66
NSUN3Q9H649 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.41■■□□□ 1.66
NSUN3Q9H649 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms