Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
KCNF1Q9H3M0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
KCNF1Q9H3M0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
KCNF1Q9H3M0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
KCNF1Q9H3M0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KCNF1Q9H3M0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KCNF1Q9H3M0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.18■■□□□ 1.78
KCNF1Q9H3M0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.17■■□□□ 1.78
KCNF1Q9H3M0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KCNF1Q9H3M0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KCNF1Q9H3M0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
KCNF1Q9H3M0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KCNF1Q9H3M0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KCNF1Q9H3M0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KCNF1Q9H3M0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KCNF1Q9H3M0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
KCNF1Q9H3M0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
KCNF1Q9H3M0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
KCNF1Q9H3M0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
KCNF1Q9H3M0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.16■■□□□ 1.78
KCNF1Q9H3M0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
KCNF1Q9H3M0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
KCNF1Q9H3M0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
KCNF1Q9H3M0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
KCNF1Q9H3M0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
KCNF1Q9H3M0 AC004812.2-201ENST00000611079 2094 ntBASIC26.15■■□□□ 1.78
KCNF1Q9H3M0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
KCNF1Q9H3M0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
KCNF1Q9H3M0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.14■■□□□ 1.78
KCNF1Q9H3M0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
KCNF1Q9H3M0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
KCNF1Q9H3M0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
KCNF1Q9H3M0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.77
KCNF1Q9H3M0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
KCNF1Q9H3M0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
KCNF1Q9H3M0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
KCNF1Q9H3M0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
KCNF1Q9H3M0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
KCNF1Q9H3M0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
KCNF1Q9H3M0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
KCNF1Q9H3M0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.13■■□□□ 1.77
KCNF1Q9H3M0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
KCNF1Q9H3M0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
KCNF1Q9H3M0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
KCNF1Q9H3M0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
KCNF1Q9H3M0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
KCNF1Q9H3M0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
KCNF1Q9H3M0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
KCNF1Q9H3M0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.11■■□□□ 1.77
KCNF1Q9H3M0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
KCNF1Q9H3M0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
KCNF1Q9H3M0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.11■■□□□ 1.77
KCNF1Q9H3M0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
KCNF1Q9H3M0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
KCNF1Q9H3M0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
KCNF1Q9H3M0 AC141586.4-201ENST00000624558 1573 ntBASIC26.1■■□□□ 1.77
KCNF1Q9H3M0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
KCNF1Q9H3M0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
KCNF1Q9H3M0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
KCNF1Q9H3M0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
KCNF1Q9H3M0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
KCNF1Q9H3M0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.09■■□□□ 1.77
KCNF1Q9H3M0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.09■■□□□ 1.77
KCNF1Q9H3M0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
KCNF1Q9H3M0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
KCNF1Q9H3M0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
KCNF1Q9H3M0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.08■■□□□ 1.77
KCNF1Q9H3M0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
KCNF1Q9H3M0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.08■■□□□ 1.77
KCNF1Q9H3M0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.08■■□□□ 1.77
KCNF1Q9H3M0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
KCNF1Q9H3M0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
KCNF1Q9H3M0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
KCNF1Q9H3M0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.07■■□□□ 1.76
KCNF1Q9H3M0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KCNF1Q9H3M0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
KCNF1Q9H3M0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
KCNF1Q9H3M0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.06■■□□□ 1.76
KCNF1Q9H3M0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
KCNF1Q9H3M0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.06■■□□□ 1.76
KCNF1Q9H3M0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.06■■□□□ 1.76
KCNF1Q9H3M0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
KCNF1Q9H3M0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
KCNF1Q9H3M0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.05■■□□□ 1.76
KCNF1Q9H3M0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
KCNF1Q9H3M0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
KCNF1Q9H3M0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
KCNF1Q9H3M0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
KCNF1Q9H3M0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
KCNF1Q9H3M0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
KCNF1Q9H3M0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
KCNF1Q9H3M0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.04■■□□□ 1.76
KCNF1Q9H3M0 ABCB10P4-201ENST00000566803 2184 ntBASIC26.04■■□□□ 1.76
KCNF1Q9H3M0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
KCNF1Q9H3M0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
KCNF1Q9H3M0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
KCNF1Q9H3M0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
KCNF1Q9H3M0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
KCNF1Q9H3M0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.03■■□□□ 1.76
KCNF1Q9H3M0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms