Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC32.63■■■□□ 2.81
ABCA3Q99758 ZNRF2P3-201ENST00000424200 374 ntBASIC32.63■■■□□ 2.81
ABCA3Q99758 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
ABCA3Q99758 AL449106.1-201ENST00000608517 1980 ntBASIC32.62■■■□□ 2.81
ABCA3Q99758 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
ABCA3Q99758 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
ABCA3Q99758 AC010997.5-201ENST00000609182 354 ntBASIC32.62■■■□□ 2.81
ABCA3Q99758 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
ABCA3Q99758 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
ABCA3Q99758 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC32.61■■■□□ 2.81
ABCA3Q99758 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC32.6■■■□□ 2.81
ABCA3Q99758 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC32.6■■■□□ 2.81
ABCA3Q99758 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
ABCA3Q99758 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
ABCA3Q99758 AC011551.1-201ENST00000614101 683 ntBASIC32.6■■■□□ 2.81
ABCA3Q99758 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC32.59■■■□□ 2.81
ABCA3Q99758 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ABCA3Q99758 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
ABCA3Q99758 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC32.59■■■□□ 2.81
ABCA3Q99758 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.59■■■□□ 2.81
ABCA3Q99758 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
ABCA3Q99758 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ABCA3Q99758 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC32.58■■■□□ 2.81
ABCA3Q99758 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC32.58■■■□□ 2.81
ABCA3Q99758 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.57■■■□□ 2.81
ABCA3Q99758 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
ABCA3Q99758 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
ABCA3Q99758 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
ABCA3Q99758 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
ABCA3Q99758 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
ABCA3Q99758 EXOG-217ENST00000630638 197 ntTSL 5 BASIC32.57■■■□□ 2.8
ABCA3Q99758 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC32.56■■■□□ 2.8
ABCA3Q99758 AC026271.2-201ENST00000428091 497 ntBASIC32.56■■■□□ 2.8
ABCA3Q99758 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC32.56■■■□□ 2.8
ABCA3Q99758 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC32.56■■■□□ 2.8
ABCA3Q99758 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
ABCA3Q99758 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
ABCA3Q99758 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC32.55■■■□□ 2.8
ABCA3Q99758 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
ABCA3Q99758 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.55■■■□□ 2.8
ABCA3Q99758 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
ABCA3Q99758 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC32.53■■■□□ 2.8
ABCA3Q99758 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ABCA3Q99758 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC32.53■■■□□ 2.8
ABCA3Q99758 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC32.53■■■□□ 2.8
ABCA3Q99758 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC32.52■■■□□ 2.8
ABCA3Q99758 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
ABCA3Q99758 AC133561.4-201ENST00000566112 224 ntBASIC32.51■■■□□ 2.8
ABCA3Q99758 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC32.51■■■□□ 2.79
ABCA3Q99758 AC005837.3-201ENST00000612163 286 ntBASIC32.51■■■□□ 2.79
ABCA3Q99758 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
ABCA3Q99758 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
ABCA3Q99758 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
ABCA3Q99758 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
ABCA3Q99758 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC32.5■■■□□ 2.79
ABCA3Q99758 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
ABCA3Q99758 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
ABCA3Q99758 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
ABCA3Q99758 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
ABCA3Q99758 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
ABCA3Q99758 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
ABCA3Q99758 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
ABCA3Q99758 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC32.47■■■□□ 2.79
ABCA3Q99758 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
ABCA3Q99758 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
ABCA3Q99758 TK2-202ENST00000417693 1046 ntTSL 2 BASIC32.46■■■□□ 2.79
ABCA3Q99758 CD72-202ENST00000378430 585 ntTSL 3 BASIC32.46■■■□□ 2.79
ABCA3Q99758 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
ABCA3Q99758 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.78
ABCA3Q99758 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC32.45■■■□□ 2.78
ABCA3Q99758 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC32.45■■■□□ 2.78
ABCA3Q99758 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
ABCA3Q99758 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
ABCA3Q99758 AL031432.3-201ENST00000607698 485 ntBASIC32.45■■■□□ 2.78
ABCA3Q99758 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
ABCA3Q99758 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
ABCA3Q99758 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
ABCA3Q99758 AK3-203ENST00000447596 705 ntTSL 2 BASIC32.44■■■□□ 2.78
ABCA3Q99758 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC32.44■■■□□ 2.78
ABCA3Q99758 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
ABCA3Q99758 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
ABCA3Q99758 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
ABCA3Q99758 EBPL-204ENST00000378272 766 ntTSL 3 BASIC32.43■■■□□ 2.78
ABCA3Q99758 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
ABCA3Q99758 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
ABCA3Q99758 SUDS3P1-201ENST00000505831 966 ntBASIC32.43■■■□□ 2.78
ABCA3Q99758 AL356740.2-201ENST00000601559 647 ntBASIC32.43■■■□□ 2.78
ABCA3Q99758 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
ABCA3Q99758 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC32.42■■■□□ 2.78
ABCA3Q99758 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
ABCA3Q99758 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
ABCA3Q99758 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC32.42■■■□□ 2.78
ABCA3Q99758 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
ABCA3Q99758 LGR4-203ENST00000480977 492 ntTSL 2 BASIC32.42■■■□□ 2.78
ABCA3Q99758 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
ABCA3Q99758 AC106739.1-201ENST00000617035 715 ntBASIC32.42■■■□□ 2.78
ABCA3Q99758 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.41■■■□□ 2.78
ABCA3Q99758 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC32.4■■■□□ 2.78
ABCA3Q99758 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
ABCA3Q99758 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms