Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
USP6NLQ92738 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
USP6NLQ92738 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
USP6NLQ92738 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
USP6NLQ92738 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
USP6NLQ92738 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.97
USP6NLQ92738 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
USP6NLQ92738 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
USP6NLQ92738 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.38■■□□□ 1.97
USP6NLQ92738 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.38■■□□□ 1.97
USP6NLQ92738 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
USP6NLQ92738 BX255925.1-201ENST00000566954 1854 ntBASIC27.38■■□□□ 1.97
USP6NLQ92738 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
USP6NLQ92738 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
USP6NLQ92738 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.37■■□□□ 1.97
USP6NLQ92738 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.37■■□□□ 1.97
USP6NLQ92738 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.37■■□□□ 1.97
USP6NLQ92738 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.37■■□□□ 1.97
USP6NLQ92738 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP6NLQ92738 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
USP6NLQ92738 MIR4281-201ENST00000580852 62 ntBASIC27.36■■□□□ 1.97
USP6NLQ92738 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP6NLQ92738 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP6NLQ92738 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
USP6NLQ92738 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
USP6NLQ92738 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
USP6NLQ92738 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.35■■□□□ 1.97
USP6NLQ92738 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
USP6NLQ92738 DRD5P2-201ENST00000421395 2012 ntBASIC27.35■■□□□ 1.97
USP6NLQ92738 NALT1-201ENST00000429224 738 ntTSL 5 BASIC27.35■■□□□ 1.97
USP6NLQ92738 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.35■■□□□ 1.97
USP6NLQ92738 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.35■■□□□ 1.97
USP6NLQ92738 RALB-208ENST00000631312 311 ntTSL 5 BASIC27.35■■□□□ 1.97
USP6NLQ92738 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
USP6NLQ92738 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP6NLQ92738 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.34■■□□□ 1.97
USP6NLQ92738 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.34■■□□□ 1.97
USP6NLQ92738 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.34■■□□□ 1.97
USP6NLQ92738 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.34■■□□□ 1.97
USP6NLQ92738 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
USP6NLQ92738 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP6NLQ92738 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.33■■□□□ 1.97
USP6NLQ92738 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.33■■□□□ 1.97
USP6NLQ92738 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
USP6NLQ92738 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USP6NLQ92738 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USP6NLQ92738 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP6NLQ92738 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP6NLQ92738 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.32■■□□□ 1.96
USP6NLQ92738 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.32■■□□□ 1.96
USP6NLQ92738 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
USP6NLQ92738 LINC01003-201ENST00000564834 1764 ntBASIC27.32■■□□□ 1.96
USP6NLQ92738 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP6NLQ92738 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USP6NLQ92738 AL117332.1-201ENST00000622628 974 ntBASIC27.31■■□□□ 1.96
USP6NLQ92738 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP6NLQ92738 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP6NLQ92738 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
USP6NLQ92738 MIR3621-201ENST00000580529 85 ntBASIC27.3■■□□□ 1.96
USP6NLQ92738 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP6NLQ92738 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.3■■□□□ 1.96
USP6NLQ92738 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC27.3■■□□□ 1.96
USP6NLQ92738 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
USP6NLQ92738 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.29■■□□□ 1.96
USP6NLQ92738 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP6NLQ92738 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP6NLQ92738 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP6NLQ92738 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
USP6NLQ92738 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.28■■□□□ 1.96
USP6NLQ92738 AL136116.3-201ENST00000402907 1138 ntBASIC27.28■■□□□ 1.96
USP6NLQ92738 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.28■■□□□ 1.96
USP6NLQ92738 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP6NLQ92738 AC142472.1-201ENST00000612013 1741 ntBASIC27.27■■□□□ 1.96
USP6NLQ92738 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
USP6NLQ92738 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
USP6NLQ92738 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
USP6NLQ92738 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.27■■□□□ 1.96
USP6NLQ92738 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.96
USP6NLQ92738 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
USP6NLQ92738 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.26■■□□□ 1.95
USP6NLQ92738 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
USP6NLQ92738 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
USP6NLQ92738 AC010997.5-201ENST00000609182 354 ntBASIC27.26■■□□□ 1.95
USP6NLQ92738 AC110285.6-201ENST00000617652 491 ntBASIC27.26■■□□□ 1.95
USP6NLQ92738 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP6NLQ92738 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
USP6NLQ92738 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.25■■□□□ 1.95
USP6NLQ92738 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.25■■□□□ 1.95
USP6NLQ92738 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
USP6NLQ92738 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP6NLQ92738 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
USP6NLQ92738 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP6NLQ92738 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP6NLQ92738 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP6NLQ92738 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
USP6NLQ92738 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.24■■□□□ 1.95
USP6NLQ92738 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
USP6NLQ92738 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP6NLQ92738 MIR6724-1-201ENST00000616420 92 ntBASIC27.24■■□□□ 1.95
USP6NLQ92738 MIR6724-2-201ENST00000616483 92 ntBASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms