Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC37.28■■■■□ 3.56
ABCA9Q8IUA7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC37.27■■■■□ 3.56
ABCA9Q8IUA7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC37.27■■■■□ 3.56
ABCA9Q8IUA7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC37.27■■■■□ 3.56
ABCA9Q8IUA7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC37.26■■■■□ 3.56
ABCA9Q8IUA7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
ABCA9Q8IUA7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC37.26■■■■□ 3.56
ABCA9Q8IUA7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC37.26■■■■□ 3.55
ABCA9Q8IUA7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC37.25■■■■□ 3.55
ABCA9Q8IUA7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
ABCA9Q8IUA7 RASSF1-AS1-201ENST00000629828 790 ntBASIC37.25■■■■□ 3.55
ABCA9Q8IUA7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC37.24■■■■□ 3.55
ABCA9Q8IUA7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
ABCA9Q8IUA7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
ABCA9Q8IUA7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC37.23■■■■□ 3.55
ABCA9Q8IUA7 AC026271.2-201ENST00000428091 497 ntBASIC37.23■■■■□ 3.55
ABCA9Q8IUA7 AC011551.1-201ENST00000614101 683 ntBASIC37.23■■■■□ 3.55
ABCA9Q8IUA7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC37.23■■■■□ 3.55
ABCA9Q8IUA7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC37.23■■■■□ 3.55
ABCA9Q8IUA7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC37.23■■■■□ 3.55
ABCA9Q8IUA7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC37.22■■■■□ 3.55
ABCA9Q8IUA7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
ABCA9Q8IUA7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC37.22■■■■□ 3.55
ABCA9Q8IUA7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC37.22■■■■□ 3.55
ABCA9Q8IUA7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC37.21■■■■□ 3.55
ABCA9Q8IUA7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC37.21■■■■□ 3.55
ABCA9Q8IUA7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC37.21■■■■□ 3.55
ABCA9Q8IUA7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC37.21■■■■□ 3.55
ABCA9Q8IUA7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC37.21■■■■□ 3.55
ABCA9Q8IUA7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC37.2■■■■□ 3.55
ABCA9Q8IUA7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC37.2■■■■□ 3.55
ABCA9Q8IUA7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC37.2■■■■□ 3.55
ABCA9Q8IUA7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC37.19■■■■□ 3.54
ABCA9Q8IUA7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC37.19■■■■□ 3.54
ABCA9Q8IUA7 AL449106.1-201ENST00000608517 1980 ntBASIC37.18■■■■□ 3.54
ABCA9Q8IUA7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC37.18■■■■□ 3.54
ABCA9Q8IUA7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC37.17■■■■□ 3.54
ABCA9Q8IUA7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC37.17■■■■□ 3.54
ABCA9Q8IUA7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
ABCA9Q8IUA7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC37.16■■■■□ 3.54
ABCA9Q8IUA7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
ABCA9Q8IUA7 AL356740.2-201ENST00000601559 647 ntBASIC37.16■■■■□ 3.54
ABCA9Q8IUA7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
ABCA9Q8IUA7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
ABCA9Q8IUA7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC37.15■■■■□ 3.54
ABCA9Q8IUA7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
ABCA9Q8IUA7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC37.14■■■■□ 3.54
ABCA9Q8IUA7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
ABCA9Q8IUA7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
ABCA9Q8IUA7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC37.14■■■■□ 3.54
ABCA9Q8IUA7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC37.14■■■■□ 3.54
ABCA9Q8IUA7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC37.13■■■■□ 3.53
ABCA9Q8IUA7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC37.12■■■■□ 3.53
ABCA9Q8IUA7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC37.12■■■■□ 3.53
ABCA9Q8IUA7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC37.11■■■■□ 3.53
ABCA9Q8IUA7 AL031432.3-201ENST00000607698 485 ntBASIC37.1■■■■□ 3.53
ABCA9Q8IUA7 AC106739.1-201ENST00000617035 715 ntBASIC37.1■■■■□ 3.53
ABCA9Q8IUA7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
ABCA9Q8IUA7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
ABCA9Q8IUA7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC37.1■■■■□ 3.53
ABCA9Q8IUA7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
ABCA9Q8IUA7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC37.09■■■■□ 3.53
ABCA9Q8IUA7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC37.09■■■■□ 3.53
ABCA9Q8IUA7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC37.09■■■■□ 3.53
ABCA9Q8IUA7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
ABCA9Q8IUA7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
ABCA9Q8IUA7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC37.08■■■■□ 3.53
ABCA9Q8IUA7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC37.08■■■■□ 3.53
ABCA9Q8IUA7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC37.07■■■■□ 3.53
ABCA9Q8IUA7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC37.07■■■■□ 3.52
ABCA9Q8IUA7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC37.07■■■■□ 3.52
ABCA9Q8IUA7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC37.06■■■■□ 3.52
ABCA9Q8IUA7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
ABCA9Q8IUA7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC37.06■■■■□ 3.52
ABCA9Q8IUA7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
ABCA9Q8IUA7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
ABCA9Q8IUA7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
ABCA9Q8IUA7 CD72-202ENST00000378430 585 ntTSL 3 BASIC37.05■■■■□ 3.52
ABCA9Q8IUA7 AK3-203ENST00000447596 705 ntTSL 2 BASIC37.05■■■■□ 3.52
ABCA9Q8IUA7 SUDS3P1-201ENST00000505831 966 ntBASIC37.05■■■■□ 3.52
ABCA9Q8IUA7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
ABCA9Q8IUA7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC37.04■■■■□ 3.52
ABCA9Q8IUA7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC37.04■■■■□ 3.52
ABCA9Q8IUA7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC37.04■■■■□ 3.52
ABCA9Q8IUA7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC37.04■■■■□ 3.52
ABCA9Q8IUA7 AC092666.2-201ENST00000613287 246 ntBASIC37.04■■■■□ 3.52
ABCA9Q8IUA7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
ABCA9Q8IUA7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC37.03■■■■□ 3.52
ABCA9Q8IUA7 AC104564.3-201ENST00000582367 638 ntBASIC37.03■■■■□ 3.52
ABCA9Q8IUA7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC37.03■■■■□ 3.52
ABCA9Q8IUA7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC37.03■■■■□ 3.52
ABCA9Q8IUA7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC37.03■■■■□ 3.52
ABCA9Q8IUA7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC37.03■■■■□ 3.52
ABCA9Q8IUA7 AC135279.3-201ENST00000610945 1311 ntBASIC37.03■■■■□ 3.52
ABCA9Q8IUA7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
ABCA9Q8IUA7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC37.02■■■■□ 3.52
ABCA9Q8IUA7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
ABCA9Q8IUA7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
ABCA9Q8IUA7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
ABCA9Q8IUA7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms