Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIN54Q6MZP7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LIN54Q6MZP7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LIN54Q6MZP7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LIN54Q6MZP7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LIN54Q6MZP7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LIN54Q6MZP7 AC010501.1-201ENST00000606270 1962 ntBASIC20.29■□□□□ 0.84
LIN54Q6MZP7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LIN54Q6MZP7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LIN54Q6MZP7 LINC01971-201ENST00000617888 1048 ntBASIC20.29■□□□□ 0.84
LIN54Q6MZP7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LIN54Q6MZP7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIN54Q6MZP7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIN54Q6MZP7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LIN54Q6MZP7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIN54Q6MZP7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LIN54Q6MZP7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIN54Q6MZP7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIN54Q6MZP7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LIN54Q6MZP7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.28■□□□□ 0.84
LIN54Q6MZP7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.28■□□□□ 0.84
LIN54Q6MZP7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIN54Q6MZP7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
LIN54Q6MZP7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIN54Q6MZP7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LIN54Q6MZP7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.27■□□□□ 0.84
LIN54Q6MZP7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LIN54Q6MZP7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.27■□□□□ 0.84
LIN54Q6MZP7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LIN54Q6MZP7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LIN54Q6MZP7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.26■□□□□ 0.83
LIN54Q6MZP7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.26■□□□□ 0.83
LIN54Q6MZP7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LIN54Q6MZP7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.26■□□□□ 0.83
LIN54Q6MZP7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LIN54Q6MZP7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LIN54Q6MZP7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.25■□□□□ 0.83
LIN54Q6MZP7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.25■□□□□ 0.83
LIN54Q6MZP7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LIN54Q6MZP7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LIN54Q6MZP7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LIN54Q6MZP7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LIN54Q6MZP7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.24■□□□□ 0.83
LIN54Q6MZP7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LIN54Q6MZP7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
LIN54Q6MZP7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LIN54Q6MZP7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.24■□□□□ 0.83
LIN54Q6MZP7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.24■□□□□ 0.83
LIN54Q6MZP7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIN54Q6MZP7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LIN54Q6MZP7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIN54Q6MZP7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.24■□□□□ 0.83
LIN54Q6MZP7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LIN54Q6MZP7 WHAMMP3-201ENST00000611636 1609 ntBASIC20.24■□□□□ 0.83
LIN54Q6MZP7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LIN54Q6MZP7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LIN54Q6MZP7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.23■□□□□ 0.83
LIN54Q6MZP7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN54Q6MZP7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
LIN54Q6MZP7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN54Q6MZP7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN54Q6MZP7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN54Q6MZP7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.23■□□□□ 0.83
LIN54Q6MZP7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN54Q6MZP7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LIN54Q6MZP7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.21■□□□□ 0.83
LIN54Q6MZP7 DUX4L11-201ENST00000611504 1267 ntBASIC20.21■□□□□ 0.83
LIN54Q6MZP7 DUX4L12-201ENST00000614593 1267 ntBASIC20.21■□□□□ 0.83
LIN54Q6MZP7 DUX4L14-201ENST00000621227 1267 ntBASIC20.21■□□□□ 0.83
LIN54Q6MZP7 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.21■□□□□ 0.83
LIN54Q6MZP7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LIN54Q6MZP7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.21■□□□□ 0.83
LIN54Q6MZP7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN54Q6MZP7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LIN54Q6MZP7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN54Q6MZP7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.21■□□□□ 0.83
LIN54Q6MZP7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN54Q6MZP7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN54Q6MZP7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.2■□□□□ 0.82
LIN54Q6MZP7 AC110285.7-201ENST00000624417 1536 ntBASIC20.2■□□□□ 0.82
LIN54Q6MZP7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN54Q6MZP7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN54Q6MZP7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN54Q6MZP7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
LIN54Q6MZP7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIN54Q6MZP7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIN54Q6MZP7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms