Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC34.46■■■■□ 3.11
RPGRIP1LQ68CZ1 UNC93B8-201ENST00000511903 705 ntBASIC34.46■■■■□ 3.11
RPGRIP1LQ68CZ1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC34.46■■■■□ 3.11
RPGRIP1LQ68CZ1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
RPGRIP1LQ68CZ1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
RPGRIP1LQ68CZ1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
RPGRIP1LQ68CZ1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC34.44■■■■□ 3.1
RPGRIP1LQ68CZ1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
RPGRIP1LQ68CZ1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
RPGRIP1LQ68CZ1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC34.44■■■■□ 3.1
RPGRIP1LQ68CZ1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
RPGRIP1LQ68CZ1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC34.43■■■■□ 3.1
RPGRIP1LQ68CZ1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
RPGRIP1LQ68CZ1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
RPGRIP1LQ68CZ1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC34.42■■■■□ 3.1
RPGRIP1LQ68CZ1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC34.42■■■■□ 3.1
RPGRIP1LQ68CZ1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC34.42■■■■□ 3.1
RPGRIP1LQ68CZ1 AC019069.1-201ENST00000610008 1333 ntBASIC34.42■■■■□ 3.1
RPGRIP1LQ68CZ1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC34.41■■■■□ 3.1
RPGRIP1LQ68CZ1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC34.41■■■■□ 3.1
RPGRIP1LQ68CZ1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
RPGRIP1LQ68CZ1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC34.41■■■■□ 3.1
RPGRIP1LQ68CZ1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
RPGRIP1LQ68CZ1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC34.41■■■■□ 3.1
RPGRIP1LQ68CZ1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC34.41■■■■□ 3.1
RPGRIP1LQ68CZ1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
RPGRIP1LQ68CZ1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
RPGRIP1LQ68CZ1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
RPGRIP1LQ68CZ1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
RPGRIP1LQ68CZ1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC34.4■■■■□ 3.1
RPGRIP1LQ68CZ1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC34.4■■■■□ 3.1
RPGRIP1LQ68CZ1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC34.4■■■■□ 3.1
RPGRIP1LQ68CZ1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC34.39■■■■□ 3.1
RPGRIP1LQ68CZ1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC34.39■■■■□ 3.1
RPGRIP1LQ68CZ1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC34.39■■■■□ 3.1
RPGRIP1LQ68CZ1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
RPGRIP1LQ68CZ1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
RPGRIP1LQ68CZ1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC34.38■■■■□ 3.09
RPGRIP1LQ68CZ1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC34.38■■■■□ 3.09
RPGRIP1LQ68CZ1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
RPGRIP1LQ68CZ1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC34.37■■■■□ 3.09
RPGRIP1LQ68CZ1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
RPGRIP1LQ68CZ1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC34.36■■■■□ 3.09
RPGRIP1LQ68CZ1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
RPGRIP1LQ68CZ1 AC142086.6-201ENST00000621154 1765 ntBASIC34.36■■■■□ 3.09
RPGRIP1LQ68CZ1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
RPGRIP1LQ68CZ1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
RPGRIP1LQ68CZ1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC34.35■■■■□ 3.09
RPGRIP1LQ68CZ1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
RPGRIP1LQ68CZ1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC34.35■■■■□ 3.09
RPGRIP1LQ68CZ1 KRT16P3-201ENST00000439127 1283 ntBASIC34.34■■■■□ 3.09
RPGRIP1LQ68CZ1 MIR4281-201ENST00000580852 62 ntBASIC34.34■■■■□ 3.09
RPGRIP1LQ68CZ1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC34.34■■■■□ 3.09
RPGRIP1LQ68CZ1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC34.33■■■■□ 3.09
RPGRIP1LQ68CZ1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC34.33■■■■□ 3.09
RPGRIP1LQ68CZ1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC34.33■■■■□ 3.09
RPGRIP1LQ68CZ1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC34.33■■■■□ 3.09
RPGRIP1LQ68CZ1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
RPGRIP1LQ68CZ1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC34.33■■■■□ 3.09
RPGRIP1LQ68CZ1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
RPGRIP1LQ68CZ1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
RPGRIP1LQ68CZ1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.09
RPGRIP1LQ68CZ1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC34.32■■■■□ 3.08
RPGRIP1LQ68CZ1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC34.32■■■■□ 3.08
RPGRIP1LQ68CZ1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
RPGRIP1LQ68CZ1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
RPGRIP1LQ68CZ1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC34.32■■■■□ 3.08
RPGRIP1LQ68CZ1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
RPGRIP1LQ68CZ1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
RPGRIP1LQ68CZ1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC34.31■■■■□ 3.08
RPGRIP1LQ68CZ1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
RPGRIP1LQ68CZ1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
RPGRIP1LQ68CZ1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
RPGRIP1LQ68CZ1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC34.31■■■■□ 3.08
RPGRIP1LQ68CZ1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
RPGRIP1LQ68CZ1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
RPGRIP1LQ68CZ1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC34.3■■■■□ 3.08
RPGRIP1LQ68CZ1 AC092028.1-203ENST00000608262 953 ntBASIC34.3■■■■□ 3.08
RPGRIP1LQ68CZ1 AC011551.1-201ENST00000614101 683 ntBASIC34.3■■■■□ 3.08
RPGRIP1LQ68CZ1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC34.29■■■■□ 3.08
RPGRIP1LQ68CZ1 AC008406.3-201ENST00000620001 1374 ntBASIC34.29■■■■□ 3.08
RPGRIP1LQ68CZ1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC34.29■■■■□ 3.08
RPGRIP1LQ68CZ1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
RPGRIP1LQ68CZ1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC34.29■■■■□ 3.08
RPGRIP1LQ68CZ1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC34.29■■■■□ 3.08
RPGRIP1LQ68CZ1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC34.29■■■■□ 3.08
RPGRIP1LQ68CZ1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC34.28■■■■□ 3.08
RPGRIP1LQ68CZ1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC34.27■■■■□ 3.08
RPGRIP1LQ68CZ1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
RPGRIP1LQ68CZ1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC34.27■■■■□ 3.08
RPGRIP1LQ68CZ1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC34.26■■■■□ 3.08
RPGRIP1LQ68CZ1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
RPGRIP1LQ68CZ1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC34.26■■■■□ 3.07
RPGRIP1LQ68CZ1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC34.26■■■■□ 3.07
RPGRIP1LQ68CZ1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC34.25■■■■□ 3.07
RPGRIP1LQ68CZ1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
RPGRIP1LQ68CZ1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
RPGRIP1LQ68CZ1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC34.24■■■■□ 3.07
RPGRIP1LQ68CZ1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC34.24■■■■□ 3.07
RPGRIP1LQ68CZ1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC34.24■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms