Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UBE2D3P61077 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D3P61077 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
UBE2D3P61077 AC079834.2-201ENST00000609776 1949 ntBASIC16.91■□□□□ 0.3
UBE2D3P61077 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D3P61077 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.91■□□□□ 0.3
UBE2D3P61077 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D3P61077 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D3P61077 CLDN5-201ENST00000403084 2357 ntBASIC16.91■□□□□ 0.3
UBE2D3P61077 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
UBE2D3P61077 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D3P61077 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.9■□□□□ 0.3
UBE2D3P61077 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
UBE2D3P61077 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D3P61077 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D3P61077 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D3P61077 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D3P61077 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
UBE2D3P61077 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D3P61077 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D3P61077 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
UBE2D3P61077 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2D3P61077 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
UBE2D3P61077 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2D3P61077 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2D3P61077 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2D3P61077 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2D3P61077 AC142381.3-201ENST00000568208 1670 ntBASIC16.88■□□□□ 0.29
UBE2D3P61077 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.88■□□□□ 0.29
UBE2D3P61077 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.88■□□□□ 0.29
UBE2D3P61077 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2D3P61077 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2D3P61077 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2D3P61077 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2D3P61077 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2D3P61077 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2D3P61077 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2D3P61077 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2D3P61077 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.87■□□□□ 0.29
UBE2D3P61077 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.87■□□□□ 0.29
UBE2D3P61077 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2D3P61077 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.87■□□□□ 0.29
UBE2D3P61077 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.86■□□□□ 0.29
UBE2D3P61077 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2D3P61077 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2D3P61077 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
UBE2D3P61077 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.86■□□□□ 0.29
UBE2D3P61077 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2D3P61077 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2D3P61077 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.86■□□□□ 0.29
UBE2D3P61077 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D3P61077 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D3P61077 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D3P61077 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D3P61077 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D3P61077 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.85■□□□□ 0.29
UBE2D3P61077 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.85■□□□□ 0.29
UBE2D3P61077 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.85■□□□□ 0.29
UBE2D3P61077 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D3P61077 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D3P61077 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D3P61077 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D3P61077 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D3P61077 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
UBE2D3P61077 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2D3P61077 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2D3P61077 AC022211.4-201ENST00000625094 2161 ntBASIC16.84■□□□□ 0.29
UBE2D3P61077 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.84■□□□□ 0.29
UBE2D3P61077 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.84■□□□□ 0.29
UBE2D3P61077 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2D3P61077 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2D3P61077 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2D3P61077 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2D3P61077 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2D3P61077 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
UBE2D3P61077 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
UBE2D3P61077 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2D3P61077 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2D3P61077 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
UBE2D3P61077 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2D3P61077 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2D3P61077 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.82■□□□□ 0.28
UBE2D3P61077 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D3P61077 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D3P61077 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D3P61077 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D3P61077 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D3P61077 AL157400.5-201ENST00000507624 621 ntBASIC16.82■□□□□ 0.28
UBE2D3P61077 MIR7108-201ENST00000614319 87 ntBASIC16.82■□□□□ 0.28
UBE2D3P61077 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D3P61077 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D3P61077 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D3P61077 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2D3P61077 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D3P61077 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2D3P61077 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D3P61077 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms