Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61BP60468 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61BP60468 AC019069.1-201ENST00000610008 1333 ntBASIC12.86□□□□□ -0.35
SEC61BP60468 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC12.85□□□□□ -0.35
SEC61BP60468 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61BP60468 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
SEC61BP60468 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61BP60468 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
SEC61BP60468 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61BP60468 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SEC61BP60468 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SEC61BP60468 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61BP60468 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61BP60468 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SEC61BP60468 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC12.84□□□□□ -0.35
SEC61BP60468 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61BP60468 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
SEC61BP60468 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC12.84□□□□□ -0.35
SEC61BP60468 MTURN-203ENST00000409688 843 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC61BP60468 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC12.84□□□□□ -0.35
SEC61BP60468 AC137630.3-201ENST00000607245 391 ntBASIC12.84□□□□□ -0.35
SEC61BP60468 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61BP60468 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61BP60468 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC12.84□□□□□ -0.35
SEC61BP60468 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61BP60468 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61BP60468 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61BP60468 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SEC61BP60468 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
SEC61BP60468 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61BP60468 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC12.83□□□□□ -0.36
SEC61BP60468 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SEC61BP60468 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61BP60468 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61BP60468 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC12.83□□□□□ -0.36
SEC61BP60468 AC120024.1-201ENST00000562672 995 ntBASIC12.83□□□□□ -0.36
SEC61BP60468 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC12.83□□□□□ -0.36
SEC61BP60468 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SEC61BP60468 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61BP60468 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61BP60468 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC12.83□□□□□ -0.36
SEC61BP60468 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61BP60468 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61BP60468 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SEC61BP60468 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61BP60468 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61BP60468 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61BP60468 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61BP60468 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SEC61BP60468 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC12.82□□□□□ -0.36
SEC61BP60468 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC12.82□□□□□ -0.36
SEC61BP60468 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC12.82□□□□□ -0.36
SEC61BP60468 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
SEC61BP60468 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61BP60468 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61BP60468 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61BP60468 AP004609.3-201ENST00000610705 1884 ntBASIC12.81□□□□□ -0.36
SEC61BP60468 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC12.81□□□□□ -0.36
SEC61BP60468 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61BP60468 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61BP60468 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC12.81□□□□□ -0.36
SEC61BP60468 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61BP60468 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61BP60468 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61BP60468 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SEC61BP60468 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61BP60468 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61BP60468 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61BP60468 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SEC61BP60468 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61BP60468 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61BP60468 TSPY9P-201ENST00000440215 945 ntBASIC12.8□□□□□ -0.36
SEC61BP60468 TSPY11P-201ENST00000442607 1045 ntBASIC12.8□□□□□ -0.36
SEC61BP60468 AC011551.1-201ENST00000614101 683 ntBASIC12.8□□□□□ -0.36
SEC61BP60468 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61BP60468 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61BP60468 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC61BP60468 AC021242.3-201ENST00000607598 1377 ntBASIC12.8□□□□□ -0.36
SEC61BP60468 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
SEC61BP60468 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61BP60468 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61BP60468 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61BP60468 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61BP60468 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SEC61BP60468 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC61BP60468 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61BP60468 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC61BP60468 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61BP60468 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SEC61BP60468 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61BP60468 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SEC61BP60468 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC12.78□□□□□ -0.36
SEC61BP60468 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SEC61BP60468 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SEC61BP60468 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC12.78□□□□□ -0.36
SEC61BP60468 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC61BP60468 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61BP60468 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC12.78□□□□□ -0.36
SEC61BP60468 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61BP60468 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms