Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SLC6A10P-202ENST00000431994 2058 ntBASIC26.36■■□□□ 1.81
PMS1P54277 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.36■■□□□ 1.81
PMS1P54277 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PMS1P54277 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PMS1P54277 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PMS1P54277 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PMS1P54277 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.35■■□□□ 1.81
PMS1P54277 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PMS1P54277 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PMS1P54277 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
PMS1P54277 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PMS1P54277 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.34■■□□□ 1.81
PMS1P54277 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.34■■□□□ 1.81
PMS1P54277 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.34■■□□□ 1.81
PMS1P54277 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PMS1P54277 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PMS1P54277 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PMS1P54277 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
PMS1P54277 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PMS1P54277 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
PMS1P54277 RP9P-202ENST00000450133 1212 ntBASIC26.33■■□□□ 1.81
PMS1P54277 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PMS1P54277 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.33■■□□□ 1.81
PMS1P54277 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PMS1P54277 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
PMS1P54277 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PMS1P54277 GPX1-201ENST00000419349 1106 ntBASIC26.32■■□□□ 1.8
PMS1P54277 AC093536.1-201ENST00000569153 554 ntBASIC26.32■■□□□ 1.8
PMS1P54277 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PMS1P54277 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PMS1P54277 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PMS1P54277 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
PMS1P54277 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.31■■□□□ 1.8
PMS1P54277 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
PMS1P54277 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
PMS1P54277 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.3■■□□□ 1.8
PMS1P54277 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PMS1P54277 AC007029.1-201ENST00000604183 313 ntBASIC26.3■■□□□ 1.8
PMS1P54277 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PMS1P54277 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PMS1P54277 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PMS1P54277 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
PMS1P54277 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PMS1P54277 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PMS1P54277 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
PMS1P54277 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.29■■□□□ 1.8
PMS1P54277 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.29■■□□□ 1.8
PMS1P54277 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PMS1P54277 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PMS1P54277 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.29■■□□□ 1.8
PMS1P54277 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PMS1P54277 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.29■■□□□ 1.8
PMS1P54277 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PMS1P54277 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PMS1P54277 AL139125.2-201ENST00000623134 1869 ntBASIC26.28■■□□□ 1.8
PMS1P54277 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.28■■□□□ 1.8
PMS1P54277 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
PMS1P54277 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.27■■□□□ 1.8
PMS1P54277 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PMS1P54277 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.27■■□□□ 1.8
PMS1P54277 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PMS1P54277 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PMS1P54277 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
PMS1P54277 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PMS1P54277 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PMS1P54277 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
PMS1P54277 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PMS1P54277 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PMS1P54277 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PMS1P54277 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
PMS1P54277 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PMS1P54277 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.25■■□□□ 1.79
PMS1P54277 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PMS1P54277 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PMS1P54277 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.25■■□□□ 1.79
PMS1P54277 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PMS1P54277 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PMS1P54277 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PMS1P54277 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
PMS1P54277 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.24■■□□□ 1.79
PMS1P54277 RAP2CP1-202ENST00000605179 643 ntBASIC26.24■■□□□ 1.79
PMS1P54277 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
PMS1P54277 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PMS1P54277 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PMS1P54277 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.22■■□□□ 1.79
PMS1P54277 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PMS1P54277 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PMS1P54277 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
PMS1P54277 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.22■■□□□ 1.79
PMS1P54277 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.22■■□□□ 1.79
PMS1P54277 AC026202.3-201ENST00000600805 1127 ntBASIC26.22■■□□□ 1.79
PMS1P54277 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
PMS1P54277 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.22■■□□□ 1.79
PMS1P54277 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PMS1P54277 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PMS1P54277 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
PMS1P54277 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PMS1P54277 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PMS1P54277 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
PMS1P54277 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms