Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.75■■■□□ 2.51
COL15A1P39059 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
COL15A1P39059 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
COL15A1P39059 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
COL15A1P39059 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
COL15A1P39059 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.74■■■□□ 2.51
COL15A1P39059 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
COL15A1P39059 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL15A1P39059 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL15A1P39059 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
COL15A1P39059 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL15A1P39059 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL15A1P39059 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
COL15A1P39059 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.72■■■□□ 2.51
COL15A1P39059 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.72■■■□□ 2.51
COL15A1P39059 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
COL15A1P39059 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
COL15A1P39059 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
COL15A1P39059 AC137630.3-201ENST00000607245 391 ntBASIC30.71■■■□□ 2.51
COL15A1P39059 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.71■■■□□ 2.51
COL15A1P39059 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
COL15A1P39059 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.71■■■□□ 2.51
COL15A1P39059 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.7■■■□□ 2.51
COL15A1P39059 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
COL15A1P39059 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
COL15A1P39059 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.69■■■□□ 2.5
COL15A1P39059 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
COL15A1P39059 AC120024.1-201ENST00000562672 995 ntBASIC30.68■■■□□ 2.5
COL15A1P39059 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
COL15A1P39059 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
COL15A1P39059 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
COL15A1P39059 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COL15A1P39059 AC142472.1-201ENST00000612013 1741 ntBASIC30.67■■■□□ 2.5
COL15A1P39059 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.67■■■□□ 2.5
COL15A1P39059 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
COL15A1P39059 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COL15A1P39059 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.66■■■□□ 2.5
COL15A1P39059 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.66■■■□□ 2.5
COL15A1P39059 AC021242.3-201ENST00000607598 1377 ntBASIC30.66■■■□□ 2.5
COL15A1P39059 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.66■■■□□ 2.5
COL15A1P39059 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.65■■■□□ 2.5
COL15A1P39059 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
COL15A1P39059 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL15A1P39059 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL15A1P39059 TSPY9P-201ENST00000440215 945 ntBASIC30.64■■■□□ 2.5
COL15A1P39059 TSPY11P-201ENST00000442607 1045 ntBASIC30.64■■■□□ 2.5
COL15A1P39059 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
COL15A1P39059 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.63■■■□□ 2.49
COL15A1P39059 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.62■■■□□ 2.49
COL15A1P39059 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
COL15A1P39059 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL15A1P39059 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
COL15A1P39059 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL15A1P39059 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL15A1P39059 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.61■■■□□ 2.49
COL15A1P39059 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
COL15A1P39059 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
COL15A1P39059 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.61■■■□□ 2.49
COL15A1P39059 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
COL15A1P39059 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
COL15A1P39059 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
COL15A1P39059 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.6■■■□□ 2.49
COL15A1P39059 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
COL15A1P39059 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.6■■■□□ 2.49
COL15A1P39059 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
COL15A1P39059 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
COL15A1P39059 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
COL15A1P39059 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
COL15A1P39059 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
COL15A1P39059 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.59■■■□□ 2.49
COL15A1P39059 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.59■■■□□ 2.49
COL15A1P39059 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
COL15A1P39059 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
COL15A1P39059 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL15A1P39059 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL15A1P39059 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.58■■■□□ 2.49
COL15A1P39059 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.58■■■□□ 2.49
COL15A1P39059 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.57■■■□□ 2.48
COL15A1P39059 MIR4281-201ENST00000580852 62 ntBASIC30.57■■■□□ 2.48
COL15A1P39059 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.57■■■□□ 2.48
COL15A1P39059 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL15A1P39059 MIR935-201ENST00000401179 91 ntBASIC30.56■■■□□ 2.48
COL15A1P39059 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL15A1P39059 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL15A1P39059 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.55■■■□□ 2.48
COL15A1P39059 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL15A1P39059 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.55■■■□□ 2.48
COL15A1P39059 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL15A1P39059 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.54■■■□□ 2.48
COL15A1P39059 AC131281.2-201ENST00000520478 145 ntBASIC30.54■■■□□ 2.48
COL15A1P39059 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.54■■■□□ 2.48
COL15A1P39059 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL15A1P39059 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.54■■■□□ 2.48
COL15A1P39059 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL15A1P39059 AC092028.1-203ENST00000608262 953 ntBASIC30.54■■■□□ 2.48
COL15A1P39059 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL15A1P39059 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
COL15A1P39059 MIR638-201ENST00000385237 100 ntBASIC30.53■■■□□ 2.48
COL15A1P39059 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.53■■■□□ 2.48
COL15A1P39059 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms