Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
LINGO3P0C6S8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.91■■□□□ 1.26
LINGO3P0C6S8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LINGO3P0C6S8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
LINGO3P0C6S8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
LINGO3P0C6S8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
LINGO3P0C6S8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
LINGO3P0C6S8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LINGO3P0C6S8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
LINGO3P0C6S8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LINGO3P0C6S8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LINGO3P0C6S8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
LINGO3P0C6S8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
LINGO3P0C6S8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.9■■□□□ 1.26
LINGO3P0C6S8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.9■■□□□ 1.26
LINGO3P0C6S8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LINGO3P0C6S8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
LINGO3P0C6S8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.9■■□□□ 1.26
LINGO3P0C6S8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LINGO3P0C6S8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
LINGO3P0C6S8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
LINGO3P0C6S8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.89■■□□□ 1.25
LINGO3P0C6S8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
LINGO3P0C6S8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LINGO3P0C6S8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LINGO3P0C6S8 AC008813.1-201ENST00000536597 885 ntBASIC22.88■■□□□ 1.25
LINGO3P0C6S8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.88■■□□□ 1.25
LINGO3P0C6S8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
LINGO3P0C6S8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
LINGO3P0C6S8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
LINGO3P0C6S8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
LINGO3P0C6S8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
LINGO3P0C6S8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.87■■□□□ 1.25
LINGO3P0C6S8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LINGO3P0C6S8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LINGO3P0C6S8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LINGO3P0C6S8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.87■■□□□ 1.25
LINGO3P0C6S8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
LINGO3P0C6S8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LINGO3P0C6S8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
LINGO3P0C6S8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LINGO3P0C6S8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
LINGO3P0C6S8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.86■■□□□ 1.25
LINGO3P0C6S8 AC138932.3-201ENST00000567634 1902 ntBASIC22.85■■□□□ 1.25
LINGO3P0C6S8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.85■■□□□ 1.25
LINGO3P0C6S8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.85■■□□□ 1.25
LINGO3P0C6S8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LINGO3P0C6S8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.84■■□□□ 1.25
LINGO3P0C6S8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LINGO3P0C6S8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.84■■□□□ 1.25
LINGO3P0C6S8 MIR639-201ENST00000384974 98 ntBASIC22.84■■□□□ 1.25
LINGO3P0C6S8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LINGO3P0C6S8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
LINGO3P0C6S8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
LINGO3P0C6S8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.84■■□□□ 1.25
LINGO3P0C6S8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.83■■□□□ 1.25
LINGO3P0C6S8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
LINGO3P0C6S8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
LINGO3P0C6S8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LINGO3P0C6S8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LINGO3P0C6S8 HLA-V-202ENST00000446817 847 ntBASIC22.82■■□□□ 1.24
LINGO3P0C6S8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.82■■□□□ 1.24
LINGO3P0C6S8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.82■■□□□ 1.24
LINGO3P0C6S8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LINGO3P0C6S8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LINGO3P0C6S8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LINGO3P0C6S8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.82■■□□□ 1.24
LINGO3P0C6S8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
LINGO3P0C6S8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
LINGO3P0C6S8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LINGO3P0C6S8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
LINGO3P0C6S8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LINGO3P0C6S8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LINGO3P0C6S8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LINGO3P0C6S8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
LINGO3P0C6S8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
LINGO3P0C6S8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LINGO3P0C6S8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LINGO3P0C6S8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.8■■□□□ 1.24
LINGO3P0C6S8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.8■■□□□ 1.24
LINGO3P0C6S8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.79■■□□□ 1.24
LINGO3P0C6S8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.79■■□□□ 1.24
LINGO3P0C6S8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.79■■□□□ 1.24
LINGO3P0C6S8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
LINGO3P0C6S8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.79■■□□□ 1.24
LINGO3P0C6S8 AC148477.6-201ENST00000623746 465 ntBASIC22.79■■□□□ 1.24
LINGO3P0C6S8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
LINGO3P0C6S8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LINGO3P0C6S8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.78■■□□□ 1.24
LINGO3P0C6S8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LINGO3P0C6S8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.78■■□□□ 1.24
LINGO3P0C6S8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
LINGO3P0C6S8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
LINGO3P0C6S8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.78■■□□□ 1.24
LINGO3P0C6S8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LINGO3P0C6S8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LINGO3P0C6S8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LINGO3P0C6S8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LINGO3P0C6S8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
LINGO3P0C6S8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms