Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
P04436 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
P04436 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
P04436 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
P04436 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
P04436 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
P04436 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
P04436 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
P04436 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.85■■□□□ 1.09
P04436 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
P04436 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
P04436 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.85■■□□□ 1.09
P04436 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
P04436 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
P04436 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
P04436 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
P04436 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
P04436 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
P04436 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
P04436 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
P04436 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
P04436 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
P04436 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.83■■□□□ 1.09
P04436 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
P04436 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.83■■□□□ 1.09
P04436 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.83■■□□□ 1.09
P04436 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.83■■□□□ 1.09
P04436 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
P04436 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
P04436 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
P04436 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
P04436 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
P04436 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
P04436 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
P04436 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.82■■□□□ 1.08
P04436 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.82■■□□□ 1.08
P04436 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.82■■□□□ 1.08
P04436 AC022616.5-201ENST00000518796 181 ntBASIC21.82■■□□□ 1.08
P04436 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.82■■□□□ 1.08
P04436 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.82■■□□□ 1.08
P04436 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.82■■□□□ 1.08
P04436 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
P04436 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
P04436 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
P04436 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
P04436 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
P04436 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.81■■□□□ 1.08
P04436 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P04436 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P04436 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.81■■□□□ 1.08
P04436 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
P04436 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
P04436 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
P04436 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
P04436 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
P04436 AL451085.2-201ENST00000605085 799 ntBASIC21.8■■□□□ 1.08
P04436 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
P04436 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.79■■□□□ 1.08
P04436 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
P04436 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
P04436 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
P04436 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
P04436 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
P04436 AC103724.3-201ENST00000564481 992 ntBASIC21.79■■□□□ 1.08
P04436 AL031848.2-201ENST00000607670 837 ntBASIC21.79■■□□□ 1.08
P04436 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
P04436 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
P04436 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.78■■□□□ 1.08
P04436 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
P04436 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.77■■□□□ 1.08
P04436 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
P04436 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
P04436 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.77■■□□□ 1.08
P04436 ERN1-208ENST00000606895 2068 ntBASIC21.77■■□□□ 1.08
P04436 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.77■■□□□ 1.08
P04436 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.77■■□□□ 1.08
P04436 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
P04436 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
P04436 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
P04436 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
P04436 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
P04436 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
P04436 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
P04436 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
P04436 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
P04436 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
P04436 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
P04436 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.75■■□□□ 1.07
P04436 AC092803.2-201ENST00000564287 1899 ntBASIC21.75■■□□□ 1.07
P04436 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
P04436 AL592295.1-201ENST00000400984 884 ntBASIC21.75■■□□□ 1.07
P04436 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.75■■□□□ 1.07
P04436 AL035685.1-201ENST00000636663 812 ntBASIC21.75■■□□□ 1.07
P04436 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
P04436 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
P04436 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
P04436 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
P04436 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
P04436 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
P04436 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms