Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.03■■□□□ 1.28
NTN3O00634 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NTN3O00634 AC008406.3-201ENST00000620001 1374 ntBASIC23.02■■□□□ 1.28
NTN3O00634 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NTN3O00634 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NTN3O00634 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NTN3O00634 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NTN3O00634 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.02■■□□□ 1.28
NTN3O00634 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NTN3O00634 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.02■■□□□ 1.28
NTN3O00634 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NTN3O00634 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NTN3O00634 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NTN3O00634 KRT16P3-201ENST00000439127 1283 ntBASIC23.01■■□□□ 1.27
NTN3O00634 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.01■■□□□ 1.27
NTN3O00634 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.01■■□□□ 1.27
NTN3O00634 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NTN3O00634 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NTN3O00634 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23■■□□□ 1.27
NTN3O00634 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23■■□□□ 1.27
NTN3O00634 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23■■□□□ 1.27
NTN3O00634 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23■■□□□ 1.27
NTN3O00634 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23■■□□□ 1.27
NTN3O00634 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
NTN3O00634 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.99■■□□□ 1.27
NTN3O00634 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.99■■□□□ 1.27
NTN3O00634 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.99■■□□□ 1.27
NTN3O00634 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
NTN3O00634 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
NTN3O00634 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.98■■□□□ 1.27
NTN3O00634 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NTN3O00634 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.98■■□□□ 1.27
NTN3O00634 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NTN3O00634 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NTN3O00634 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
NTN3O00634 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
NTN3O00634 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.97■■□□□ 1.27
NTN3O00634 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NTN3O00634 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
NTN3O00634 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NTN3O00634 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NTN3O00634 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
NTN3O00634 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NTN3O00634 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NTN3O00634 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NTN3O00634 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.95■■□□□ 1.26
NTN3O00634 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
NTN3O00634 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.95■■□□□ 1.26
NTN3O00634 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NTN3O00634 MIR4281-201ENST00000580852 62 ntBASIC22.95■■□□□ 1.26
NTN3O00634 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.95■■□□□ 1.26
NTN3O00634 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NTN3O00634 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NTN3O00634 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.94■■□□□ 1.26
NTN3O00634 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
NTN3O00634 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
NTN3O00634 TSPY9P-201ENST00000440215 945 ntBASIC22.94■■□□□ 1.26
NTN3O00634 TSPY11P-201ENST00000442607 1045 ntBASIC22.94■■□□□ 1.26
NTN3O00634 AC092028.1-203ENST00000608262 953 ntBASIC22.94■■□□□ 1.26
NTN3O00634 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
NTN3O00634 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NTN3O00634 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.93■■□□□ 1.26
NTN3O00634 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.93■■□□□ 1.26
NTN3O00634 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NTN3O00634 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NTN3O00634 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NTN3O00634 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.92■■□□□ 1.26
NTN3O00634 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NTN3O00634 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
NTN3O00634 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
NTN3O00634 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NTN3O00634 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.91■■□□□ 1.26
NTN3O00634 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.91■■□□□ 1.26
NTN3O00634 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NTN3O00634 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
NTN3O00634 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NTN3O00634 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.91■■□□□ 1.26
NTN3O00634 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NTN3O00634 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NTN3O00634 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.9■■□□□ 1.26
NTN3O00634 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NTN3O00634 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NTN3O00634 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
NTN3O00634 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
NTN3O00634 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NTN3O00634 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
NTN3O00634 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NTN3O00634 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.89■■□□□ 1.25
NTN3O00634 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.89■■□□□ 1.25
NTN3O00634 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.89■■□□□ 1.25
NTN3O00634 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.89■■□□□ 1.25
NTN3O00634 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
NTN3O00634 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NTN3O00634 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
NTN3O00634 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
NTN3O00634 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.88■■□□□ 1.25
NTN3O00634 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.88■■□□□ 1.25
NTN3O00634 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.88■■□□□ 1.25
NTN3O00634 AC011551.1-201ENST00000614101 683 ntBASIC22.88■■□□□ 1.25
NTN3O00634 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms