Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.87■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.87■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.87■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.86■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.86■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.86■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.86■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.86■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.85■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.85■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 AC131281.2-201ENST00000520478 145 ntBASIC23.85■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 AL139246.5-201ENST00000606645 996 ntBASIC23.85■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.84■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.84■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.84■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.83■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 MIR4281-201ENST00000580852 62 ntBASIC23.83■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MSANTD3-TMEFF1A0A0A6YYJ0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.82■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.82■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 AC142472.1-201ENST00000612013 1741 ntBASIC23.81■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 AL136116.3-201ENST00000402907 1138 ntBASIC23.81■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.79■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 AC010997.5-201ENST00000609182 354 ntBASIC23.79■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.78■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.78■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.78■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.78■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.78■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.77■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.77■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 AL117332.1-201ENST00000622628 974 ntBASIC23.77■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
MSANTD3-TMEFF1A0A0A6YYJ0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.75■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.74■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.74■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.74■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.74■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.74■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 MTDHP2-201ENST00000601468 714 ntBASIC23.74■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 AP004609.3-201ENST00000610705 1884 ntBASIC23.74■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms