Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 AC097639.1-201ENST00000565519 1891 ntBASIC19.52■□□□□ 0.71
SAA2-SAA4A0A096LPE2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.52■□□□□ 0.71
SAA2-SAA4A0A096LPE2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SAA2-SAA4A0A096LPE2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SAA2-SAA4A0A096LPE2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SAA2-SAA4A0A096LPE2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.51■□□□□ 0.71
SAA2-SAA4A0A096LPE2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SAA2-SAA4A0A096LPE2 AC022211.4-201ENST00000625094 2161 ntBASIC19.5■□□□□ 0.71
SAA2-SAA4A0A096LPE2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SAA2-SAA4A0A096LPE2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
SAA2-SAA4A0A096LPE2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SAA2-SAA4A0A096LPE2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.5■□□□□ 0.71
SAA2-SAA4A0A096LPE2 AC142381.3-201ENST00000568208 1670 ntBASIC19.49■□□□□ 0.71
SAA2-SAA4A0A096LPE2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SAA2-SAA4A0A096LPE2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.49■□□□□ 0.71
SAA2-SAA4A0A096LPE2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.49■□□□□ 0.71
SAA2-SAA4A0A096LPE2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SAA2-SAA4A0A096LPE2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SAA2-SAA4A0A096LPE2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SAA2-SAA4A0A096LPE2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SAA2-SAA4A0A096LPE2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SAA2-SAA4A0A096LPE2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SAA2-SAA4A0A096LPE2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SAA2-SAA4A0A096LPE2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.48■□□□□ 0.71
SAA2-SAA4A0A096LPE2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SAA2-SAA4A0A096LPE2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SAA2-SAA4A0A096LPE2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.47■□□□□ 0.71
SAA2-SAA4A0A096LPE2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SAA2-SAA4A0A096LPE2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SAA2-SAA4A0A096LPE2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.47■□□□□ 0.71
SAA2-SAA4A0A096LPE2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SAA2-SAA4A0A096LPE2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SAA2-SAA4A0A096LPE2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SAA2-SAA4A0A096LPE2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SAA2-SAA4A0A096LPE2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SAA2-SAA4A0A096LPE2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SAA2-SAA4A0A096LPE2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.46■□□□□ 0.71
SAA2-SAA4A0A096LPE2 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.46■□□□□ 0.71
SAA2-SAA4A0A096LPE2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
SAA2-SAA4A0A096LPE2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.46■□□□□ 0.71
SAA2-SAA4A0A096LPE2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
SAA2-SAA4A0A096LPE2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SAA2-SAA4A0A096LPE2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SAA2-SAA4A0A096LPE2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SAA2-SAA4A0A096LPE2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SAA2-SAA4A0A096LPE2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SAA2-SAA4A0A096LPE2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SAA2-SAA4A0A096LPE2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SAA2-SAA4A0A096LPE2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SAA2-SAA4A0A096LPE2 AC138932.3-201ENST00000567634 1902 ntBASIC19.43■□□□□ 0.7
SAA2-SAA4A0A096LPE2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SAA2-SAA4A0A096LPE2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SAA2-SAA4A0A096LPE2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.43■□□□□ 0.7
SAA2-SAA4A0A096LPE2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SAA2-SAA4A0A096LPE2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SAA2-SAA4A0A096LPE2 RAP2CP1-202ENST00000605179 643 ntBASIC19.42■□□□□ 0.7
SAA2-SAA4A0A096LPE2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SAA2-SAA4A0A096LPE2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SAA2-SAA4A0A096LPE2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SAA2-SAA4A0A096LPE2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SAA2-SAA4A0A096LPE2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SAA2-SAA4A0A096LPE2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.42■□□□□ 0.7
SAA2-SAA4A0A096LPE2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAA2-SAA4A0A096LPE2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAA2-SAA4A0A096LPE2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAA2-SAA4A0A096LPE2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAA2-SAA4A0A096LPE2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAA2-SAA4A0A096LPE2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.41■□□□□ 0.7
SAA2-SAA4A0A096LPE2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAA2-SAA4A0A096LPE2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SAA2-SAA4A0A096LPE2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAA2-SAA4A0A096LPE2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAA2-SAA4A0A096LPE2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAA2-SAA4A0A096LPE2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.4■□□□□ 0.7
SAA2-SAA4A0A096LPE2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.4■□□□□ 0.7
SAA2-SAA4A0A096LPE2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAA2-SAA4A0A096LPE2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAA2-SAA4A0A096LPE2 AC026202.3-201ENST00000600805 1127 ntBASIC19.4■□□□□ 0.7
SAA2-SAA4A0A096LPE2 RNF126P1-201ENST00000567452 1320 ntBASIC19.4■□□□□ 0.7
SAA2-SAA4A0A096LPE2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAA2-SAA4A0A096LPE2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.4■□□□□ 0.7
SAA2-SAA4A0A096LPE2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SAA2-SAA4A0A096LPE2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SAA2-SAA4A0A096LPE2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.39■□□□□ 0.7
SAA2-SAA4A0A096LPE2 SLC6A10P-202ENST00000431994 2058 ntBASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms