Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALX4Q9H161 LINC01124-201ENST00000409786 2117 ntBASIC20.25■□□□□ 0.83
ALX4Q9H161 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALX4Q9H161 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ALX4Q9H161 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.25■□□□□ 0.83
ALX4Q9H161 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALX4Q9H161 AP003733.4-201ENST00000623785 1697 ntBASIC20.24■□□□□ 0.83
ALX4Q9H161 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALX4Q9H161 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALX4Q9H161 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ALX4Q9H161 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALX4Q9H161 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALX4Q9H161 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.23■□□□□ 0.83
ALX4Q9H161 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.23■□□□□ 0.83
ALX4Q9H161 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ALX4Q9H161 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALX4Q9H161 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.22■□□□□ 0.83
ALX4Q9H161 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALX4Q9H161 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.22■□□□□ 0.83
ALX4Q9H161 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALX4Q9H161 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALX4Q9H161 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALX4Q9H161 AC096887.2-201ENST00000623443 1957 ntBASIC20.21■□□□□ 0.83
ALX4Q9H161 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALX4Q9H161 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALX4Q9H161 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALX4Q9H161 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALX4Q9H161 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ALX4Q9H161 ZNRF2P2-203ENST00000454624 420 ntBASIC20.2■□□□□ 0.82
ALX4Q9H161 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ALX4Q9H161 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALX4Q9H161 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ALX4Q9H161 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALX4Q9H161 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALX4Q9H161 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALX4Q9H161 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ALX4Q9H161 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALX4Q9H161 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.19■□□□□ 0.82
ALX4Q9H161 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ALX4Q9H161 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ALX4Q9H161 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALX4Q9H161 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALX4Q9H161 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALX4Q9H161 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ALX4Q9H161 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ALX4Q9H161 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALX4Q9H161 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALX4Q9H161 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALX4Q9H161 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALX4Q9H161 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALX4Q9H161 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALX4Q9H161 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALX4Q9H161 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ALX4Q9H161 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.17■□□□□ 0.82
ALX4Q9H161 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.17■□□□□ 0.82
ALX4Q9H161 MIR7108-201ENST00000614319 87 ntBASIC20.17■□□□□ 0.82
ALX4Q9H161 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALX4Q9H161 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALX4Q9H161 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALX4Q9H161 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALX4Q9H161 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.16■□□□□ 0.82
ALX4Q9H161 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALX4Q9H161 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALX4Q9H161 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALX4Q9H161 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALX4Q9H161 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALX4Q9H161 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALX4Q9H161 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALX4Q9H161 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.15■□□□□ 0.82
ALX4Q9H161 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ALX4Q9H161 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALX4Q9H161 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.15■□□□□ 0.82
ALX4Q9H161 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALX4Q9H161 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.15■□□□□ 0.82
ALX4Q9H161 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALX4Q9H161 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALX4Q9H161 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.14■□□□□ 0.81
ALX4Q9H161 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALX4Q9H161 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALX4Q9H161 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALX4Q9H161 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALX4Q9H161 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALX4Q9H161 DUSP8P5-201ENST00000422884 1815 ntBASIC20.13■□□□□ 0.81
ALX4Q9H161 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.13■□□□□ 0.81
ALX4Q9H161 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALX4Q9H161 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALX4Q9H161 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALX4Q9H161 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALX4Q9H161 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.13■□□□□ 0.81
ALX4Q9H161 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.13■□□□□ 0.81
ALX4Q9H161 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
ALX4Q9H161 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALX4Q9H161 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALX4Q9H161 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALX4Q9H161 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
ALX4Q9H161 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALX4Q9H161 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALX4Q9H161 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.12■□□□□ 0.81
ALX4Q9H161 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
ALX4Q9H161 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms