Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSBP3Q9BWW4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20■□□□□ 0.79
SSBP3Q9BWW4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSBP3Q9BWW4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSBP3Q9BWW4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSBP3Q9BWW4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSBP3Q9BWW4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.99■□□□□ 0.79
SSBP3Q9BWW4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSBP3Q9BWW4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSBP3Q9BWW4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
SSBP3Q9BWW4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SSBP3Q9BWW4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.99■□□□□ 0.79
SSBP3Q9BWW4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSBP3Q9BWW4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.98■□□□□ 0.79
SSBP3Q9BWW4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.98■□□□□ 0.79
SSBP3Q9BWW4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSBP3Q9BWW4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSBP3Q9BWW4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSBP3Q9BWW4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSBP3Q9BWW4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSBP3Q9BWW4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSBP3Q9BWW4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSBP3Q9BWW4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.97■□□□□ 0.79
SSBP3Q9BWW4 RARRES2P1-201ENST00000474487 481 ntBASIC19.97■□□□□ 0.79
SSBP3Q9BWW4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSBP3Q9BWW4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSBP3Q9BWW4 AC135731.1-201ENST00000569415 2548 ntBASIC19.96■□□□□ 0.79
SSBP3Q9BWW4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSBP3Q9BWW4 RPS2P7-201ENST00000447334 885 ntBASIC19.96■□□□□ 0.79
SSBP3Q9BWW4 AC087393.1-201ENST00000582896 145 ntBASIC19.96■□□□□ 0.79
SSBP3Q9BWW4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSBP3Q9BWW4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSBP3Q9BWW4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSBP3Q9BWW4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.96■□□□□ 0.79
SSBP3Q9BWW4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SSBP3Q9BWW4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSBP3Q9BWW4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.95■□□□□ 0.78
SSBP3Q9BWW4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSBP3Q9BWW4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSBP3Q9BWW4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.95■□□□□ 0.78
SSBP3Q9BWW4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSBP3Q9BWW4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.95■□□□□ 0.78
SSBP3Q9BWW4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSBP3Q9BWW4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSBP3Q9BWW4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSBP3Q9BWW4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSBP3Q9BWW4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.94■□□□□ 0.78
SSBP3Q9BWW4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.94■□□□□ 0.78
SSBP3Q9BWW4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSBP3Q9BWW4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSBP3Q9BWW4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
SSBP3Q9BWW4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.94■□□□□ 0.78
SSBP3Q9BWW4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.94■□□□□ 0.78
SSBP3Q9BWW4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SSBP3Q9BWW4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSBP3Q9BWW4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSBP3Q9BWW4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.93■□□□□ 0.78
SSBP3Q9BWW4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.93■□□□□ 0.78
SSBP3Q9BWW4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSBP3Q9BWW4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSBP3Q9BWW4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSBP3Q9BWW4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSBP3Q9BWW4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSBP3Q9BWW4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SSBP3Q9BWW4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSBP3Q9BWW4 YBX1P4-201ENST00000392794 808 ntBASIC19.92■□□□□ 0.78
SSBP3Q9BWW4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSBP3Q9BWW4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.92■□□□□ 0.78
SSBP3Q9BWW4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SSBP3Q9BWW4 AL121749.1-202ENST00000609313 2153 ntBASIC19.92■□□□□ 0.78
SSBP3Q9BWW4 KRT8P33-201ENST00000508125 1423 ntBASIC19.92■□□□□ 0.78
SSBP3Q9BWW4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.91■□□□□ 0.78
SSBP3Q9BWW4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SSBP3Q9BWW4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.91■□□□□ 0.78
SSBP3Q9BWW4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
SSBP3Q9BWW4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.91■□□□□ 0.78
SSBP3Q9BWW4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSBP3Q9BWW4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.91■□□□□ 0.78
SSBP3Q9BWW4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.91■□□□□ 0.78
SSBP3Q9BWW4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.91■□□□□ 0.78
SSBP3Q9BWW4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SSBP3Q9BWW4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSBP3Q9BWW4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSBP3Q9BWW4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSBP3Q9BWW4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSBP3Q9BWW4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.9■□□□□ 0.78
SSBP3Q9BWW4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSBP3Q9BWW4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSBP3Q9BWW4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSBP3Q9BWW4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSBP3Q9BWW4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSBP3Q9BWW4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSBP3Q9BWW4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.89■□□□□ 0.77
SSBP3Q9BWW4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.89■□□□□ 0.77
SSBP3Q9BWW4 AC019171.1-201ENST00000601251 1056 ntBASIC19.89■□□□□ 0.77
SSBP3Q9BWW4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSBP3Q9BWW4 PVT1_1.1-201ENST00000615125 194 ntBASIC19.89■□□□□ 0.77
SSBP3Q9BWW4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SSBP3Q9BWW4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.88■□□□□ 0.77
SSBP3Q9BWW4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms