Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56Q96MV1 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM56Q96MV1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56Q96MV1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM56Q96MV1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TMEM56Q96MV1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM56Q96MV1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM56Q96MV1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM56Q96MV1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM56Q96MV1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.69■□□□□ 0.74
TMEM56Q96MV1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56Q96MV1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56Q96MV1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56Q96MV1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56Q96MV1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TMEM56Q96MV1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56Q96MV1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM56Q96MV1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56Q96MV1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56Q96MV1 AP003733.4-201ENST00000623785 1697 ntBASIC19.68■□□□□ 0.74
TMEM56Q96MV1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM56Q96MV1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56Q96MV1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56Q96MV1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56Q96MV1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56Q96MV1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM56Q96MV1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56Q96MV1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TMEM56Q96MV1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56Q96MV1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM56Q96MV1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM56Q96MV1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TMEM56Q96MV1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM56Q96MV1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56Q96MV1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM56Q96MV1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56Q96MV1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56Q96MV1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56Q96MV1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56Q96MV1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56Q96MV1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.65■□□□□ 0.74
TMEM56Q96MV1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.65■□□□□ 0.74
TMEM56Q96MV1 LINC01971-201ENST00000617888 1048 ntBASIC19.65■□□□□ 0.74
TMEM56Q96MV1 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM56Q96MV1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 LINC01124-201ENST00000409786 2117 ntBASIC19.64■□□□□ 0.73
TMEM56Q96MV1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56Q96MV1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56Q96MV1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56Q96MV1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56Q96MV1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMEM56Q96MV1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
TMEM56Q96MV1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
TMEM56Q96MV1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56Q96MV1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM56Q96MV1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TMEM56Q96MV1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM56Q96MV1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM56Q96MV1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM56Q96MV1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.61■□□□□ 0.73
TMEM56Q96MV1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEM56Q96MV1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM56Q96MV1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.61■□□□□ 0.73
TMEM56Q96MV1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM56Q96MV1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM56Q96MV1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM56Q96MV1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM56Q96MV1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TMEM56Q96MV1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM56Q96MV1 AC008813.1-201ENST00000536597 885 ntBASIC19.6■□□□□ 0.73
TMEM56Q96MV1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM56Q96MV1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM56Q96MV1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM56Q96MV1 RPS2P35-201ENST00000443417 897 ntBASIC19.59■□□□□ 0.73
TMEM56Q96MV1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TMEM56Q96MV1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM56Q96MV1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM56Q96MV1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM56Q96MV1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM56Q96MV1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM56Q96MV1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM56Q96MV1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM56Q96MV1 DUX4L13-201ENST00000554103 1267 ntBASIC19.58■□□□□ 0.72
TMEM56Q96MV1 DUX4L15-201ENST00000611059 1267 ntBASIC19.58■□□□□ 0.72
TMEM56Q96MV1 DUX4L23-201ENST00000615195 1269 ntBASIC19.58■□□□□ 0.72
TMEM56Q96MV1 DUX4L24-201ENST00000617576 1269 ntBASIC19.58■□□□□ 0.72
TMEM56Q96MV1 DUX4L22-201ENST00000618238 1269 ntBASIC19.58■□□□□ 0.72
TMEM56Q96MV1 DUX4L20-201ENST00000619712 1269 ntBASIC19.58■□□□□ 0.72
TMEM56Q96MV1 DUX4L21-201ENST00000622058 1269 ntBASIC19.58■□□□□ 0.72
TMEM56Q96MV1 DUX4L10-201ENST00000622460 1267 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms