Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE2Q96FN4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.68■□□□□ 0.9
CPNE2Q96FN4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.68■□□□□ 0.9
CPNE2Q96FN4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE2Q96FN4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE2Q96FN4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE2Q96FN4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE2Q96FN4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CPNE2Q96FN4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.67■□□□□ 0.9
CPNE2Q96FN4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE2Q96FN4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CPNE2Q96FN4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE2Q96FN4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.66■□□□□ 0.9
CPNE2Q96FN4 CR559946.2-201ENST00000623684 991 ntBASIC20.66■□□□□ 0.9
CPNE2Q96FN4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CPNE2Q96FN4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE2Q96FN4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CPNE2Q96FN4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.66■□□□□ 0.9
CPNE2Q96FN4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.66■□□□□ 0.9
CPNE2Q96FN4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE2Q96FN4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.65■□□□□ 0.9
CPNE2Q96FN4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.65■□□□□ 0.9
CPNE2Q96FN4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CPNE2Q96FN4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE2Q96FN4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CPNE2Q96FN4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE2Q96FN4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE2Q96FN4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE2Q96FN4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE2Q96FN4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE2Q96FN4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE2Q96FN4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE2Q96FN4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.64■□□□□ 0.89
CPNE2Q96FN4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE2Q96FN4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE2Q96FN4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CPNE2Q96FN4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CPNE2Q96FN4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CPNE2Q96FN4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CPNE2Q96FN4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE2Q96FN4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE2Q96FN4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.63■□□□□ 0.89
CPNE2Q96FN4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE2Q96FN4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE2Q96FN4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE2Q96FN4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE2Q96FN4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE2Q96FN4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE2Q96FN4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.62■□□□□ 0.89
CPNE2Q96FN4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE2Q96FN4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE2Q96FN4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CPNE2Q96FN4 AC096887.2-201ENST00000623443 1957 ntBASIC20.61■□□□□ 0.89
CPNE2Q96FN4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE2Q96FN4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.61■□□□□ 0.89
CPNE2Q96FN4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CPNE2Q96FN4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CPNE2Q96FN4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE2Q96FN4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CPNE2Q96FN4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE2Q96FN4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE2Q96FN4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CPNE2Q96FN4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE2Q96FN4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE2Q96FN4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE2Q96FN4 ABHD17AP4-201ENST00000411545 909 ntBASIC20.59■□□□□ 0.89
CPNE2Q96FN4 MIR3648-2-201ENST00000581792 180 ntBASIC20.59■□□□□ 0.89
CPNE2Q96FN4 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE2Q96FN4 MIR3648-1-201ENST00000615959 180 ntBASIC20.59■□□□□ 0.89
CPNE2Q96FN4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE2Q96FN4 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE2Q96FN4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE2Q96FN4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CPNE2Q96FN4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.59■□□□□ 0.89
CPNE2Q96FN4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE2Q96FN4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.58■□□□□ 0.89
CPNE2Q96FN4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
CPNE2Q96FN4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.58■□□□□ 0.88
CPNE2Q96FN4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE2Q96FN4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE2Q96FN4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE2Q96FN4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE2Q96FN4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE2Q96FN4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE2Q96FN4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE2Q96FN4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE2Q96FN4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE2Q96FN4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE2Q96FN4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CPNE2Q96FN4 AC093323.1-202ENST00000635031 2045 ntBASIC20.57■□□□□ 0.88
CPNE2Q96FN4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.57■□□□□ 0.88
CPNE2Q96FN4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE2Q96FN4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE2Q96FN4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CPNE2Q96FN4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE2Q96FN4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE2Q96FN4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE2Q96FN4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE2Q96FN4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE2Q96FN4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms