Protein–RNA interactions for Protein: Q96A99

PTX4, Pentraxin-4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4Q96A99 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTX4Q96A99 MIR219A2-201ENST00000608502 1504 ntBASIC20.48■□□□□ 0.87
PTX4Q96A99 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PTX4Q96A99 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTX4Q96A99 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTX4Q96A99 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTX4Q96A99 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PTX4Q96A99 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTX4Q96A99 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PTX4Q96A99 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTX4Q96A99 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PTX4Q96A99 AC097639.1-201ENST00000565519 1891 ntBASIC20.47■□□□□ 0.87
PTX4Q96A99 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTX4Q96A99 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTX4Q96A99 AL359504.2-201ENST00000605506 1601 ntBASIC20.47■□□□□ 0.87
PTX4Q96A99 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTX4Q96A99 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
PTX4Q96A99 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PTX4Q96A99 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTX4Q96A99 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTX4Q96A99 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTX4Q96A99 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTX4Q96A99 LINC00543-201ENST00000567234 1845 ntBASIC20.45■□□□□ 0.86
PTX4Q96A99 AC141586.4-201ENST00000624558 1573 ntBASIC20.45■□□□□ 0.86
PTX4Q96A99 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTX4Q96A99 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTX4Q96A99 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTX4Q96A99 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.44■□□□□ 0.86
PTX4Q96A99 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTX4Q96A99 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTX4Q96A99 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTX4Q96A99 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.44■□□□□ 0.86
PTX4Q96A99 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTX4Q96A99 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.44■□□□□ 0.86
PTX4Q96A99 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTX4Q96A99 AL359258.2-201ENST00000564063 1566 ntBASIC20.43■□□□□ 0.86
PTX4Q96A99 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PTX4Q96A99 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTX4Q96A99 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTX4Q96A99 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTX4Q96A99 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTX4Q96A99 LINC01971-201ENST00000617888 1048 ntBASIC20.43■□□□□ 0.86
PTX4Q96A99 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.43■□□□□ 0.86
PTX4Q96A99 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTX4Q96A99 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PTX4Q96A99 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTX4Q96A99 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTX4Q96A99 AC012676.1-201ENST00000574705 1949 ntBASIC20.43■□□□□ 0.86
PTX4Q96A99 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTX4Q96A99 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PTX4Q96A99 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTX4Q96A99 SLC6A10P-202ENST00000431994 2058 ntBASIC20.42■□□□□ 0.86
PTX4Q96A99 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTX4Q96A99 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PTX4Q96A99 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
PTX4Q96A99 DUX4L13-201ENST00000554103 1267 ntBASIC20.41■□□□□ 0.86
PTX4Q96A99 DUX4L15-201ENST00000611059 1267 ntBASIC20.41■□□□□ 0.86
PTX4Q96A99 DUX4L23-201ENST00000615195 1269 ntBASIC20.41■□□□□ 0.86
PTX4Q96A99 DUX4L24-201ENST00000617576 1269 ntBASIC20.41■□□□□ 0.86
PTX4Q96A99 DUX4L22-201ENST00000618238 1269 ntBASIC20.41■□□□□ 0.86
PTX4Q96A99 DUX4L20-201ENST00000619712 1269 ntBASIC20.41■□□□□ 0.86
PTX4Q96A99 DUX4L21-201ENST00000622058 1269 ntBASIC20.41■□□□□ 0.86
PTX4Q96A99 DUX4L10-201ENST00000622460 1267 ntBASIC20.41■□□□□ 0.86
PTX4Q96A99 DUX4L25-201ENST00000624915 1269 ntBASIC20.41■□□□□ 0.86
PTX4Q96A99 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTX4Q96A99 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTX4Q96A99 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
PTX4Q96A99 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTX4Q96A99 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTX4Q96A99 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.4■□□□□ 0.86
PTX4Q96A99 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTX4Q96A99 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.4■□□□□ 0.86
PTX4Q96A99 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTX4Q96A99 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTX4Q96A99 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PTX4Q96A99 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTX4Q96A99 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTX4Q96A99 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PTX4Q96A99 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTX4Q96A99 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTX4Q96A99 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTX4Q96A99 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.38■□□□□ 0.85
PTX4Q96A99 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTX4Q96A99 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTX4Q96A99 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTX4Q96A99 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.37■□□□□ 0.85
PTX4Q96A99 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTX4Q96A99 RPS2P35-201ENST00000443417 897 ntBASIC20.37■□□□□ 0.85
PTX4Q96A99 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.37■□□□□ 0.85
PTX4Q96A99 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
PTX4Q96A99 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.37■□□□□ 0.85
PTX4Q96A99 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTX4Q96A99 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTX4Q96A99 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTX4Q96A99 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.36■□□□□ 0.85
PTX4Q96A99 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PTX4Q96A99 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.36■□□□□ 0.85
PTX4Q96A99 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTX4Q96A99 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTX4Q96A99 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms