Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SMARCC2Q8TAQ2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SMARCC2Q8TAQ2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.21■■■□□ 2.11
SMARCC2Q8TAQ2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SMARCC2Q8TAQ2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
SMARCC2Q8TAQ2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.2■■■□□ 2.1
SMARCC2Q8TAQ2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
SMARCC2Q8TAQ2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMARCC2Q8TAQ2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
SMARCC2Q8TAQ2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.18■■■□□ 2.1
SMARCC2Q8TAQ2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMARCC2Q8TAQ2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.18■■■□□ 2.1
SMARCC2Q8TAQ2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
SMARCC2Q8TAQ2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.18■■■□□ 2.1
SMARCC2Q8TAQ2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.18■■■□□ 2.1
SMARCC2Q8TAQ2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SMARCC2Q8TAQ2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.17■■■□□ 2.1
SMARCC2Q8TAQ2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SMARCC2Q8TAQ2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.17■■■□□ 2.1
SMARCC2Q8TAQ2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SMARCC2Q8TAQ2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
SMARCC2Q8TAQ2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
SMARCC2Q8TAQ2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.16■■■□□ 2.1
SMARCC2Q8TAQ2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SMARCC2Q8TAQ2 RP9P-202ENST00000450133 1212 ntBASIC28.16■■■□□ 2.1
SMARCC2Q8TAQ2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SMARCC2Q8TAQ2 MIR3960-201ENST00000583311 91 ntBASIC28.16■■■□□ 2.1
SMARCC2Q8TAQ2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
SMARCC2Q8TAQ2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SMARCC2Q8TAQ2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SMARCC2Q8TAQ2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.16■■■□□ 2.1
SMARCC2Q8TAQ2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.15■■■□□ 2.1
SMARCC2Q8TAQ2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SMARCC2Q8TAQ2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMARCC2Q8TAQ2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMARCC2Q8TAQ2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
SMARCC2Q8TAQ2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
SMARCC2Q8TAQ2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SMARCC2Q8TAQ2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SMARCC2Q8TAQ2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.13■■■□□ 2.09
SMARCC2Q8TAQ2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SMARCC2Q8TAQ2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SMARCC2Q8TAQ2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
SMARCC2Q8TAQ2 AC093536.1-201ENST00000569153 554 ntBASIC28.13■■■□□ 2.09
SMARCC2Q8TAQ2 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.13■■■□□ 2.09
SMARCC2Q8TAQ2 AC133552.2-201ENST00000619106 1032 ntBASIC28.13■■■□□ 2.09
SMARCC2Q8TAQ2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 AC009831.1-201ENST00000580420 1582 ntBASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
SMARCC2Q8TAQ2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
SMARCC2Q8TAQ2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMARCC2Q8TAQ2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMARCC2Q8TAQ2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SMARCC2Q8TAQ2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
SMARCC2Q8TAQ2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SMARCC2Q8TAQ2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SMARCC2Q8TAQ2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMARCC2Q8TAQ2 AC135731.1-201ENST00000569415 2548 ntBASIC28.11■■■□□ 2.09
SMARCC2Q8TAQ2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.1■■■□□ 2.09
SMARCC2Q8TAQ2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.1■■■□□ 2.09
SMARCC2Q8TAQ2 AC026202.3-201ENST00000600805 1127 ntBASIC28.1■■■□□ 2.09
SMARCC2Q8TAQ2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
SMARCC2Q8TAQ2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SMARCC2Q8TAQ2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SMARCC2Q8TAQ2 KRT18P60-201ENST00000312876 1297 ntBASIC28.09■■■□□ 2.09
SMARCC2Q8TAQ2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
SMARCC2Q8TAQ2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.09■■■□□ 2.09
SMARCC2Q8TAQ2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
SMARCC2Q8TAQ2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SMARCC2Q8TAQ2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
SMARCC2Q8TAQ2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SMARCC2Q8TAQ2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.08■■■□□ 2.09
SMARCC2Q8TAQ2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SMARCC2Q8TAQ2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SMARCC2Q8TAQ2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SMARCC2Q8TAQ2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SMARCC2Q8TAQ2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SMARCC2Q8TAQ2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.07■■■□□ 2.08
SMARCC2Q8TAQ2 AC012354.3-201ENST00000623734 483 ntBASIC28.07■■■□□ 2.08
SMARCC2Q8TAQ2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.07■■■□□ 2.08
SMARCC2Q8TAQ2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SMARCC2Q8TAQ2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
SMARCC2Q8TAQ2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMARCC2Q8TAQ2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.06■■■□□ 2.08
SMARCC2Q8TAQ2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMARCC2Q8TAQ2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SMARCC2Q8TAQ2 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.06■■■□□ 2.08
SMARCC2Q8TAQ2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
SMARCC2Q8TAQ2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
SMARCC2Q8TAQ2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SMARCC2Q8TAQ2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms