Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SIMC1Q8NDZ2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SIMC1Q8NDZ2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SIMC1Q8NDZ2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.58■■□□□ 1.21
SIMC1Q8NDZ2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SIMC1Q8NDZ2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SIMC1Q8NDZ2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIMC1Q8NDZ2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SIMC1Q8NDZ2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIMC1Q8NDZ2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
SIMC1Q8NDZ2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIMC1Q8NDZ2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIMC1Q8NDZ2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIMC1Q8NDZ2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.57■■□□□ 1.2
SIMC1Q8NDZ2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SIMC1Q8NDZ2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SIMC1Q8NDZ2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.56■■□□□ 1.2
SIMC1Q8NDZ2 AC096887.2-201ENST00000623443 1957 ntBASIC22.56■■□□□ 1.2
SIMC1Q8NDZ2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SIMC1Q8NDZ2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SIMC1Q8NDZ2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SIMC1Q8NDZ2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
SIMC1Q8NDZ2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.55■■□□□ 1.2
SIMC1Q8NDZ2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SIMC1Q8NDZ2 AC026202.3-201ENST00000600805 1127 ntBASIC22.55■■□□□ 1.2
SIMC1Q8NDZ2 AC010501.1-201ENST00000606270 1962 ntBASIC22.55■■□□□ 1.2
SIMC1Q8NDZ2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SIMC1Q8NDZ2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SIMC1Q8NDZ2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SIMC1Q8NDZ2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.55■■□□□ 1.2
SIMC1Q8NDZ2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIMC1Q8NDZ2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIMC1Q8NDZ2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIMC1Q8NDZ2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SIMC1Q8NDZ2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIMC1Q8NDZ2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SIMC1Q8NDZ2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SIMC1Q8NDZ2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.53■■□□□ 1.2
SIMC1Q8NDZ2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
SIMC1Q8NDZ2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SIMC1Q8NDZ2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SIMC1Q8NDZ2 RAP2CP1-202ENST00000605179 643 ntBASIC22.53■■□□□ 1.2
SIMC1Q8NDZ2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.53■■□□□ 1.2
SIMC1Q8NDZ2 AC009831.1-201ENST00000580420 1582 ntBASIC22.53■■□□□ 1.2
SIMC1Q8NDZ2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
SIMC1Q8NDZ2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.53■■□□□ 1.2
SIMC1Q8NDZ2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.52■■□□□ 1.2
SIMC1Q8NDZ2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
SIMC1Q8NDZ2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
SIMC1Q8NDZ2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SIMC1Q8NDZ2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.52■■□□□ 1.2
SIMC1Q8NDZ2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SIMC1Q8NDZ2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SIMC1Q8NDZ2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SIMC1Q8NDZ2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SIMC1Q8NDZ2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.52■■□□□ 1.19
SIMC1Q8NDZ2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIMC1Q8NDZ2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SIMC1Q8NDZ2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SIMC1Q8NDZ2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIMC1Q8NDZ2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SIMC1Q8NDZ2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIMC1Q8NDZ2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.51■■□□□ 1.19
SIMC1Q8NDZ2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SIMC1Q8NDZ2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SIMC1Q8NDZ2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SIMC1Q8NDZ2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SIMC1Q8NDZ2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SIMC1Q8NDZ2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SIMC1Q8NDZ2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SIMC1Q8NDZ2 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.5■■□□□ 1.19
SIMC1Q8NDZ2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.5■■□□□ 1.19
SIMC1Q8NDZ2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SIMC1Q8NDZ2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SIMC1Q8NDZ2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.49■■□□□ 1.19
SIMC1Q8NDZ2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.49■■□□□ 1.19
SIMC1Q8NDZ2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SIMC1Q8NDZ2 AC133552.2-201ENST00000619106 1032 ntBASIC22.49■■□□□ 1.19
SIMC1Q8NDZ2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIMC1Q8NDZ2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIMC1Q8NDZ2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SIMC1Q8NDZ2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SIMC1Q8NDZ2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.48■■□□□ 1.19
SIMC1Q8NDZ2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SIMC1Q8NDZ2 U85056.1-201ENST00000616429 682 ntBASIC22.48■■□□□ 1.19
SIMC1Q8NDZ2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SIMC1Q8NDZ2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SIMC1Q8NDZ2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.48■■□□□ 1.19
SIMC1Q8NDZ2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SIMC1Q8NDZ2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SIMC1Q8NDZ2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SIMC1Q8NDZ2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.47■■□□□ 1.19
SIMC1Q8NDZ2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SIMC1Q8NDZ2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SIMC1Q8NDZ2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SIMC1Q8NDZ2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SIMC1Q8NDZ2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SIMC1Q8NDZ2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SIMC1Q8NDZ2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SIMC1Q8NDZ2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms