Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CPSF7Q8N684 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.4■■□□□ 1.34
CPSF7Q8N684 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.4■■□□□ 1.34
CPSF7Q8N684 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CPSF7Q8N684 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CPSF7Q8N684 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.4■■□□□ 1.34
CPSF7Q8N684 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
CPSF7Q8N684 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CPSF7Q8N684 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
CPSF7Q8N684 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
CPSF7Q8N684 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.39■■□□□ 1.33
CPSF7Q8N684 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
CPSF7Q8N684 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
CPSF7Q8N684 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CPSF7Q8N684 AC096887.2-201ENST00000623443 1957 ntBASIC23.39■■□□□ 1.33
CPSF7Q8N684 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.39■■□□□ 1.33
CPSF7Q8N684 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CPSF7Q8N684 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
CPSF7Q8N684 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
CPSF7Q8N684 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.38■■□□□ 1.33
CPSF7Q8N684 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.38■■□□□ 1.33
CPSF7Q8N684 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.38■■□□□ 1.33
CPSF7Q8N684 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.38■■□□□ 1.33
CPSF7Q8N684 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CPSF7Q8N684 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
CPSF7Q8N684 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CPSF7Q8N684 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CPSF7Q8N684 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CPSF7Q8N684 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CPSF7Q8N684 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.36■■□□□ 1.33
CPSF7Q8N684 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CPSF7Q8N684 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CPSF7Q8N684 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CPSF7Q8N684 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CPSF7Q8N684 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CPSF7Q8N684 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CPSF7Q8N684 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CPSF7Q8N684 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CPSF7Q8N684 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.35■■□□□ 1.33
CPSF7Q8N684 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.35■■□□□ 1.33
CPSF7Q8N684 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.35■■□□□ 1.33
CPSF7Q8N684 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.35■■□□□ 1.33
CPSF7Q8N684 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CPSF7Q8N684 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CPSF7Q8N684 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.35■■□□□ 1.33
CPSF7Q8N684 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CPSF7Q8N684 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CPSF7Q8N684 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CPSF7Q8N684 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CPSF7Q8N684 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
CPSF7Q8N684 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CPSF7Q8N684 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.34■■□□□ 1.33
CPSF7Q8N684 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
CPSF7Q8N684 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
CPSF7Q8N684 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CPSF7Q8N684 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CPSF7Q8N684 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CPSF7Q8N684 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.33■■□□□ 1.33
CPSF7Q8N684 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.33■■□□□ 1.33
CPSF7Q8N684 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
CPSF7Q8N684 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CPSF7Q8N684 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CPSF7Q8N684 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CPSF7Q8N684 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CPSF7Q8N684 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CPSF7Q8N684 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CPSF7Q8N684 AC008813.1-201ENST00000536597 885 ntBASIC23.32■■□□□ 1.32
CPSF7Q8N684 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CPSF7Q8N684 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CPSF7Q8N684 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.32■■□□□ 1.32
CPSF7Q8N684 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CPSF7Q8N684 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.31■■□□□ 1.32
CPSF7Q8N684 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CPSF7Q8N684 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.31■■□□□ 1.32
CPSF7Q8N684 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.31■■□□□ 1.32
CPSF7Q8N684 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CPSF7Q8N684 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CPSF7Q8N684 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPSF7Q8N684 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPSF7Q8N684 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPSF7Q8N684 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CPSF7Q8N684 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPSF7Q8N684 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.3■■□□□ 1.32
CPSF7Q8N684 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPSF7Q8N684 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CPSF7Q8N684 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CPSF7Q8N684 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
CPSF7Q8N684 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CPSF7Q8N684 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CPSF7Q8N684 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CPSF7Q8N684 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CPSF7Q8N684 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CPSF7Q8N684 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.29■■□□□ 1.32
CPSF7Q8N684 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CPSF7Q8N684 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPSF7Q8N684 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPSF7Q8N684 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.28■■□□□ 1.32
CPSF7Q8N684 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CPSF7Q8N684 GPX1-201ENST00000419349 1106 ntBASIC23.28■■□□□ 1.32
CPSF7Q8N684 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms