Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ARHGEF39Q8N4T4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
ARHGEF39Q8N4T4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.83■■□□□ 1.25
ARHGEF39Q8N4T4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.83■■□□□ 1.25
ARHGEF39Q8N4T4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
ARHGEF39Q8N4T4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.83■■□□□ 1.24
ARHGEF39Q8N4T4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 AC087393.1-201ENST00000582896 145 ntBASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 ERN1-208ENST00000606895 2068 ntBASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 RPS2P7-201ENST00000447334 885 ntBASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 AC092803.2-201ENST00000564287 1899 ntBASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ARHGEF39Q8N4T4 AC096887.2-201ENST00000623443 1957 ntBASIC22.78■■□□□ 1.24
ARHGEF39Q8N4T4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 AC010501.1-201ENST00000606270 1962 ntBASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 KRT18P10-201ENST00000388836 1287 ntBASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ARHGEF39Q8N4T4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.75■■□□□ 1.23
ARHGEF39Q8N4T4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.75■■□□□ 1.23
ARHGEF39Q8N4T4 PVT1_1.1-201ENST00000615125 194 ntBASIC22.75■■□□□ 1.23
ARHGEF39Q8N4T4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
ARHGEF39Q8N4T4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 AC091060.1-201ENST00000623524 1766 ntBASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 AC074183.2-201ENST00000623112 922 ntBASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 LONRF2P2-201ENST00000439212 571 ntBASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms