Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
TMEFF1Q8IYR6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TMEFF1Q8IYR6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TMEFF1Q8IYR6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TMEFF1Q8IYR6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
TMEFF1Q8IYR6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
TMEFF1Q8IYR6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.11■■□□□ 1.45
TMEFF1Q8IYR6 UNC93B8-201ENST00000511903 705 ntBASIC24.11■■□□□ 1.45
TMEFF1Q8IYR6 AC022616.5-201ENST00000518796 181 ntBASIC24.11■■□□□ 1.45
TMEFF1Q8IYR6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.11■■□□□ 1.45
TMEFF1Q8IYR6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TMEFF1Q8IYR6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TMEFF1Q8IYR6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
TMEFF1Q8IYR6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.1■■□□□ 1.45
TMEFF1Q8IYR6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TMEFF1Q8IYR6 MIR935-201ENST00000401179 91 ntBASIC24.1■■□□□ 1.45
TMEFF1Q8IYR6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMEFF1Q8IYR6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TMEFF1Q8IYR6 AL449106.1-201ENST00000608517 1980 ntBASIC24.1■■□□□ 1.45
TMEFF1Q8IYR6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TMEFF1Q8IYR6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TMEFF1Q8IYR6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.09■■□□□ 1.45
TMEFF1Q8IYR6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMEFF1Q8IYR6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TMEFF1Q8IYR6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.09■■□□□ 1.45
TMEFF1Q8IYR6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.09■■□□□ 1.45
TMEFF1Q8IYR6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMEFF1Q8IYR6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.09■■□□□ 1.45
TMEFF1Q8IYR6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.09■■□□□ 1.45
TMEFF1Q8IYR6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
TMEFF1Q8IYR6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMEFF1Q8IYR6 KRT18P10-201ENST00000388836 1287 ntBASIC24.08■■□□□ 1.45
TMEFF1Q8IYR6 KRT16P3-201ENST00000439127 1283 ntBASIC24.08■■□□□ 1.45
TMEFF1Q8IYR6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.44
TMEFF1Q8IYR6 DRD5P2-201ENST00000421395 2012 ntBASIC24.08■■□□□ 1.44
TMEFF1Q8IYR6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMEFF1Q8IYR6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMEFF1Q8IYR6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.07■■□□□ 1.44
TMEFF1Q8IYR6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMEFF1Q8IYR6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TMEFF1Q8IYR6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMEFF1Q8IYR6 KRT18P24-201ENST00000344739 1156 ntBASIC24.06■■□□□ 1.44
TMEFF1Q8IYR6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TMEFF1Q8IYR6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
TMEFF1Q8IYR6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMEFF1Q8IYR6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMEFF1Q8IYR6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMEFF1Q8IYR6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.05■■□□□ 1.44
TMEFF1Q8IYR6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMEFF1Q8IYR6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
TMEFF1Q8IYR6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.04■■□□□ 1.44
TMEFF1Q8IYR6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
TMEFF1Q8IYR6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TMEFF1Q8IYR6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.04■■□□□ 1.44
TMEFF1Q8IYR6 TSPY9P-201ENST00000440215 945 ntBASIC24.04■■□□□ 1.44
TMEFF1Q8IYR6 TSPY11P-201ENST00000442607 1045 ntBASIC24.04■■□□□ 1.44
TMEFF1Q8IYR6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TMEFF1Q8IYR6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TMEFF1Q8IYR6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.03■■□□□ 1.44
TMEFF1Q8IYR6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.03■■□□□ 1.44
TMEFF1Q8IYR6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMEFF1Q8IYR6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TMEFF1Q8IYR6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TMEFF1Q8IYR6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TMEFF1Q8IYR6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.02■■□□□ 1.44
TMEFF1Q8IYR6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
TMEFF1Q8IYR6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TMEFF1Q8IYR6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
TMEFF1Q8IYR6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.01■■□□□ 1.43
TMEFF1Q8IYR6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.01■■□□□ 1.43
TMEFF1Q8IYR6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TMEFF1Q8IYR6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
TMEFF1Q8IYR6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TMEFF1Q8IYR6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24■■□□□ 1.43
TMEFF1Q8IYR6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24■■□□□ 1.43
TMEFF1Q8IYR6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TMEFF1Q8IYR6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
TMEFF1Q8IYR6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TMEFF1Q8IYR6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.99■■□□□ 1.43
TMEFF1Q8IYR6 AC137630.3-201ENST00000607245 391 ntBASIC23.99■■□□□ 1.43
TMEFF1Q8IYR6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
TMEFF1Q8IYR6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.99■■□□□ 1.43
TMEFF1Q8IYR6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
TMEFF1Q8IYR6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TMEFF1Q8IYR6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TMEFF1Q8IYR6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
TMEFF1Q8IYR6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TMEFF1Q8IYR6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TMEFF1Q8IYR6 AC120024.1-201ENST00000562672 995 ntBASIC23.98■■□□□ 1.43
TMEFF1Q8IYR6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
TMEFF1Q8IYR6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TMEFF1Q8IYR6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.97■■□□□ 1.43
TMEFF1Q8IYR6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TMEFF1Q8IYR6 AC021242.3-201ENST00000607598 1377 ntBASIC23.96■■□□□ 1.43
TMEFF1Q8IYR6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.96■■□□□ 1.43
TMEFF1Q8IYR6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
TMEFF1Q8IYR6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
TMEFF1Q8IYR6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TMEFF1Q8IYR6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TMEFF1Q8IYR6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms