Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL55Q7Z7F7 MED25-214ENST00000622402 642 ntTSL 5 BASIC15.33■□□□□ 0.04
MRPL55Q7Z7F7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL55Q7Z7F7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MRPL55Q7Z7F7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC15.33■□□□□ 0.04
MRPL55Q7Z7F7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL55Q7Z7F7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL55Q7Z7F7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL55Q7Z7F7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MRPL55Q7Z7F7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL55Q7Z7F7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
MRPL55Q7Z7F7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL55Q7Z7F7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL55Q7Z7F7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL55Q7Z7F7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MRPL55Q7Z7F7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL55Q7Z7F7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL55Q7Z7F7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL55Q7Z7F7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL55Q7Z7F7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC15.31■□□□□ 0.04
MRPL55Q7Z7F7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL55Q7Z7F7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MRPL55Q7Z7F7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL55Q7Z7F7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL55Q7Z7F7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL55Q7Z7F7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL55Q7Z7F7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC15.3■□□□□ 0.04
MRPL55Q7Z7F7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL55Q7Z7F7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL55Q7Z7F7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL55Q7Z7F7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL55Q7Z7F7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC15.3■□□□□ 0.04
MRPL55Q7Z7F7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL55Q7Z7F7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL55Q7Z7F7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL55Q7Z7F7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC15.29■□□□□ 0.04
MRPL55Q7Z7F7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MRPL55Q7Z7F7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL55Q7Z7F7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL55Q7Z7F7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL55Q7Z7F7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MRPL55Q7Z7F7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC15.29■□□□□ 0.04
MRPL55Q7Z7F7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL55Q7Z7F7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL55Q7Z7F7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MRPL55Q7Z7F7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC15.28■□□□□ 0.04
MRPL55Q7Z7F7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
MRPL55Q7Z7F7 MIR7108-201ENST00000614319 87 ntBASIC15.28■□□□□ 0.04
MRPL55Q7Z7F7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL55Q7Z7F7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL55Q7Z7F7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL55Q7Z7F7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL55Q7Z7F7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL55Q7Z7F7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.27■□□□□ 0.04
MRPL55Q7Z7F7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC15.27■□□□□ 0.04
MRPL55Q7Z7F7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MRPL55Q7Z7F7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MRPL55Q7Z7F7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL55Q7Z7F7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC15.27■□□□□ 0.04
MRPL55Q7Z7F7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC15.27■□□□□ 0.04
MRPL55Q7Z7F7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPL55Q7Z7F7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPL55Q7Z7F7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC15.27■□□□□ 0.03
MRPL55Q7Z7F7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
MRPL55Q7Z7F7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MRPL55Q7Z7F7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPL55Q7Z7F7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MRPL55Q7Z7F7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL55Q7Z7F7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPL55Q7Z7F7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL55Q7Z7F7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL55Q7Z7F7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL55Q7Z7F7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
MRPL55Q7Z7F7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC15.25■□□□□ 0.03
MRPL55Q7Z7F7 AC096887.2-201ENST00000623443 1957 ntBASIC15.25■□□□□ 0.03
MRPL55Q7Z7F7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC15.25■□□□□ 0.03
MRPL55Q7Z7F7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL55Q7Z7F7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC15.25■□□□□ 0.03
MRPL55Q7Z7F7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC15.25■□□□□ 0.03
MRPL55Q7Z7F7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL55Q7Z7F7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL55Q7Z7F7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms