Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.88■■■□□ 2.53
CCDC30Q5VVM6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC30Q5VVM6 RPS2P7-201ENST00000447334 885 ntBASIC30.87■■■□□ 2.53
CCDC30Q5VVM6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC30Q5VVM6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.87■■■□□ 2.53
CCDC30Q5VVM6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC30Q5VVM6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC30.86■■■□□ 2.53
CCDC30Q5VVM6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC30Q5VVM6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC30Q5VVM6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC30Q5VVM6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC30Q5VVM6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC30Q5VVM6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC30Q5VVM6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC30Q5VVM6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC30Q5VVM6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.84■■■□□ 2.53
CCDC30Q5VVM6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC30Q5VVM6 AC010980.1-201ENST00000587192 1142 ntBASIC30.84■■■□□ 2.53
CCDC30Q5VVM6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
CCDC30Q5VVM6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC30Q5VVM6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
CCDC30Q5VVM6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC30Q5VVM6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC30Q5VVM6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.82■■■□□ 2.52
CCDC30Q5VVM6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.82■■■□□ 2.52
CCDC30Q5VVM6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.82■■■□□ 2.52
CCDC30Q5VVM6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC30Q5VVM6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC30Q5VVM6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC30Q5VVM6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC30Q5VVM6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC30Q5VVM6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC30Q5VVM6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC30Q5VVM6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC30Q5VVM6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC30Q5VVM6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC30Q5VVM6 PVT1_1.1-201ENST00000615125 194 ntBASIC30.79■■■□□ 2.52
CCDC30Q5VVM6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC30Q5VVM6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.78■■■□□ 2.52
CCDC30Q5VVM6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
CCDC30Q5VVM6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.78■■■□□ 2.52
CCDC30Q5VVM6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.77■■■□□ 2.52
CCDC30Q5VVM6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC30Q5VVM6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.77■■■□□ 2.52
CCDC30Q5VVM6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.77■■■□□ 2.52
CCDC30Q5VVM6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC30Q5VVM6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.77■■■□□ 2.52
CCDC30Q5VVM6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.76■■■□□ 2.52
CCDC30Q5VVM6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CCDC30Q5VVM6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CCDC30Q5VVM6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC30Q5VVM6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC30Q5VVM6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
CCDC30Q5VVM6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.76■■■□□ 2.51
CCDC30Q5VVM6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC30Q5VVM6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC30Q5VVM6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.75■■■□□ 2.51
CCDC30Q5VVM6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC30Q5VVM6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC30Q5VVM6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.75■■■□□ 2.51
CCDC30Q5VVM6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC30Q5VVM6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC30Q5VVM6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC30Q5VVM6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC30Q5VVM6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.74■■■□□ 2.51
CCDC30Q5VVM6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.74■■■□□ 2.51
CCDC30Q5VVM6 LONRF2P2-201ENST00000439212 571 ntBASIC30.74■■■□□ 2.51
CCDC30Q5VVM6 RARRES2P1-201ENST00000474487 481 ntBASIC30.74■■■□□ 2.51
CCDC30Q5VVM6 AC019171.1-201ENST00000601251 1056 ntBASIC30.74■■■□□ 2.51
CCDC30Q5VVM6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC30Q5VVM6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC30Q5VVM6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.73■■■□□ 2.51
CCDC30Q5VVM6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.73■■■□□ 2.51
CCDC30Q5VVM6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC30Q5VVM6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC30Q5VVM6 ERN1-208ENST00000606895 2068 ntBASIC30.72■■■□□ 2.51
CCDC30Q5VVM6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.72■■■□□ 2.51
CCDC30Q5VVM6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC30Q5VVM6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CCDC30Q5VVM6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC30Q5VVM6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.71■■■□□ 2.51
CCDC30Q5VVM6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC30Q5VVM6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC30Q5VVM6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC30Q5VVM6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.71■■■□□ 2.51
CCDC30Q5VVM6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC30Q5VVM6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC30Q5VVM6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
CCDC30Q5VVM6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.7■■■□□ 2.51
CCDC30Q5VVM6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC30Q5VVM6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.7■■■□□ 2.51
CCDC30Q5VVM6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.7■■■□□ 2.51
CCDC30Q5VVM6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.7■■■□□ 2.51
CCDC30Q5VVM6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC30Q5VVM6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC30Q5VVM6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC30Q5VVM6 AC092803.2-201ENST00000564287 1899 ntBASIC30.69■■■□□ 2.5
CCDC30Q5VVM6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC30Q5VVM6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.68■■■□□ 2.5
CCDC30Q5VVM6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms