Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC37.18■■■■□ 3.54
CDC42BPAQ5VT25 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC37.18■■■■□ 3.54
CDC42BPAQ5VT25 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC37.18■■■■□ 3.54
CDC42BPAQ5VT25 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC37.18■■■■□ 3.54
CDC42BPAQ5VT25 MIR4787-201ENST00000607364 84 ntBASIC37.18■■■■□ 3.54
CDC42BPAQ5VT25 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC37.17■■■■□ 3.54
CDC42BPAQ5VT25 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC37.17■■■■□ 3.54
CDC42BPAQ5VT25 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
CDC42BPAQ5VT25 KRT16P3-201ENST00000439127 1283 ntBASIC37.17■■■■□ 3.54
CDC42BPAQ5VT25 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC37.17■■■■□ 3.54
CDC42BPAQ5VT25 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC37.16■■■■□ 3.54
CDC42BPAQ5VT25 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC37.16■■■■□ 3.54
CDC42BPAQ5VT25 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC37.16■■■■□ 3.54
CDC42BPAQ5VT25 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
CDC42BPAQ5VT25 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
CDC42BPAQ5VT25 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
CDC42BPAQ5VT25 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
CDC42BPAQ5VT25 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC37.13■■■■□ 3.54
CDC42BPAQ5VT25 AC142472.1-201ENST00000612013 1741 ntBASIC37.12■■■■□ 3.53
CDC42BPAQ5VT25 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC37.12■■■■□ 3.53
CDC42BPAQ5VT25 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC37.12■■■■□ 3.53
CDC42BPAQ5VT25 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
CDC42BPAQ5VT25 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC37.12■■■■□ 3.53
CDC42BPAQ5VT25 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC37.12■■■■□ 3.53
CDC42BPAQ5VT25 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC37.11■■■■□ 3.53
CDC42BPAQ5VT25 MIR4281-201ENST00000580852 62 ntBASIC37.1■■■■□ 3.53
CDC42BPAQ5VT25 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
CDC42BPAQ5VT25 KRT18P10-201ENST00000388836 1287 ntBASIC37.1■■■■□ 3.53
CDC42BPAQ5VT25 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
CDC42BPAQ5VT25 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
CDC42BPAQ5VT25 KRT18P24-201ENST00000344739 1156 ntBASIC37.09■■■■□ 3.53
CDC42BPAQ5VT25 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC37.08■■■■□ 3.53
CDC42BPAQ5VT25 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC37.08■■■■□ 3.53
CDC42BPAQ5VT25 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC37.08■■■■□ 3.53
CDC42BPAQ5VT25 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
CDC42BPAQ5VT25 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
CDC42BPAQ5VT25 KRT125P-201ENST00000546827 989 ntBASIC37.08■■■■□ 3.53
CDC42BPAQ5VT25 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
CDC42BPAQ5VT25 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.53
CDC42BPAQ5VT25 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC37.07■■■■□ 3.53
CDC42BPAQ5VT25 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC37.07■■■■□ 3.52
CDC42BPAQ5VT25 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC37.07■■■■□ 3.52
CDC42BPAQ5VT25 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC37.06■■■■□ 3.52
CDC42BPAQ5VT25 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC37.06■■■■□ 3.52
CDC42BPAQ5VT25 AC131281.2-201ENST00000520478 145 ntBASIC37.06■■■■□ 3.52
CDC42BPAQ5VT25 AC137630.3-201ENST00000607245 391 ntBASIC37.06■■■■□ 3.52
CDC42BPAQ5VT25 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC37.06■■■■□ 3.52
CDC42BPAQ5VT25 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC37.05■■■■□ 3.52
CDC42BPAQ5VT25 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
CDC42BPAQ5VT25 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
CDC42BPAQ5VT25 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
CDC42BPAQ5VT25 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC37.05■■■■□ 3.52
CDC42BPAQ5VT25 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC37.05■■■■□ 3.52
CDC42BPAQ5VT25 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
CDC42BPAQ5VT25 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC37.04■■■■□ 3.52
CDC42BPAQ5VT25 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
CDC42BPAQ5VT25 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC37.04■■■■□ 3.52
CDC42BPAQ5VT25 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CDC42BPAQ5VT25 BX255925.1-201ENST00000566954 1854 ntBASIC37.03■■■■□ 3.52
CDC42BPAQ5VT25 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
CDC42BPAQ5VT25 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CDC42BPAQ5VT25 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC37.02■■■■□ 3.52
CDC42BPAQ5VT25 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC37.02■■■■□ 3.52
CDC42BPAQ5VT25 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
CDC42BPAQ5VT25 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC37.02■■■■□ 3.52
CDC42BPAQ5VT25 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC37.02■■■■□ 3.52
CDC42BPAQ5VT25 AC021242.3-201ENST00000607598 1377 ntBASIC37.01■■■■□ 3.52
CDC42BPAQ5VT25 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC36.99■■■■□ 3.51
CDC42BPAQ5VT25 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC36.99■■■■□ 3.51
CDC42BPAQ5VT25 AC120024.1-201ENST00000562672 995 ntBASIC36.99■■■■□ 3.51
CDC42BPAQ5VT25 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
CDC42BPAQ5VT25 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CDC42BPAQ5VT25 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CDC42BPAQ5VT25 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC36.98■■■■□ 3.51
CDC42BPAQ5VT25 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
CDC42BPAQ5VT25 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CDC42BPAQ5VT25 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC36.97■■■■□ 3.51
CDC42BPAQ5VT25 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC36.97■■■■□ 3.51
CDC42BPAQ5VT25 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
CDC42BPAQ5VT25 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC36.96■■■■□ 3.51
CDC42BPAQ5VT25 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
CDC42BPAQ5VT25 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC36.96■■■■□ 3.51
CDC42BPAQ5VT25 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
CDC42BPAQ5VT25 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC36.95■■■■□ 3.51
CDC42BPAQ5VT25 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
CDC42BPAQ5VT25 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC36.95■■■■□ 3.51
CDC42BPAQ5VT25 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC36.95■■■■□ 3.51
CDC42BPAQ5VT25 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC36.95■■■■□ 3.5
CDC42BPAQ5VT25 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
CDC42BPAQ5VT25 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
CDC42BPAQ5VT25 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
CDC42BPAQ5VT25 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC36.94■■■■□ 3.5
CDC42BPAQ5VT25 AC008406.3-201ENST00000620001 1374 ntBASIC36.94■■■■□ 3.5
CDC42BPAQ5VT25 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC36.94■■■■□ 3.5
CDC42BPAQ5VT25 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC36.94■■■■□ 3.5
CDC42BPAQ5VT25 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC36.94■■■■□ 3.5
CDC42BPAQ5VT25 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC36.93■■■■□ 3.5
CDC42BPAQ5VT25 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC36.93■■■■□ 3.5
CDC42BPAQ5VT25 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
CDC42BPAQ5VT25 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC36.93■■■■□ 3.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms