Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFNB3Q15768 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.56■□□□□ 0.88
EFNB3Q15768 AC103834.1-201ENST00000520383 144 ntBASIC20.56■□□□□ 0.88
EFNB3Q15768 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFNB3Q15768 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFNB3Q15768 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFNB3Q15768 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFNB3Q15768 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.55■□□□□ 0.88
EFNB3Q15768 LONRF2P2-201ENST00000439212 571 ntBASIC20.55■□□□□ 0.88
EFNB3Q15768 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFNB3Q15768 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFNB3Q15768 KRT8P33-201ENST00000508125 1423 ntBASIC20.54■□□□□ 0.88
EFNB3Q15768 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFNB3Q15768 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFNB3Q15768 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EFNB3Q15768 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.53■□□□□ 0.88
EFNB3Q15768 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.53■□□□□ 0.88
EFNB3Q15768 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNB3Q15768 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EFNB3Q15768 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNB3Q15768 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.53■□□□□ 0.88
EFNB3Q15768 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNB3Q15768 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNB3Q15768 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNB3Q15768 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.53■□□□□ 0.88
EFNB3Q15768 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.53■□□□□ 0.88
EFNB3Q15768 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFNB3Q15768 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFNB3Q15768 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.52■□□□□ 0.88
EFNB3Q15768 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
EFNB3Q15768 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.52■□□□□ 0.88
EFNB3Q15768 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFNB3Q15768 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.52■□□□□ 0.87
EFNB3Q15768 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EFNB3Q15768 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
EFNB3Q15768 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.51■□□□□ 0.87
EFNB3Q15768 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.51■□□□□ 0.87
EFNB3Q15768 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
EFNB3Q15768 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.51■□□□□ 0.87
EFNB3Q15768 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.5■□□□□ 0.87
EFNB3Q15768 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.5■□□□□ 0.87
EFNB3Q15768 AL451085.2-201ENST00000605085 799 ntBASIC20.5■□□□□ 0.87
EFNB3Q15768 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNB3Q15768 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.5■□□□□ 0.87
EFNB3Q15768 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.49■□□□□ 0.87
EFNB3Q15768 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNB3Q15768 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNB3Q15768 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNB3Q15768 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.49■□□□□ 0.87
EFNB3Q15768 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNB3Q15768 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EFNB3Q15768 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFNB3Q15768 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFNB3Q15768 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EFNB3Q15768 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFNB3Q15768 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EFNB3Q15768 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFNB3Q15768 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
EFNB3Q15768 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EFNB3Q15768 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFNB3Q15768 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.48■□□□□ 0.87
EFNB3Q15768 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EFNB3Q15768 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EFNB3Q15768 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
EFNB3Q15768 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
EFNB3Q15768 AL121749.1-202ENST00000609313 2153 ntBASIC20.47■□□□□ 0.87
EFNB3Q15768 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EFNB3Q15768 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.47■□□□□ 0.87
EFNB3Q15768 AL035685.1-201ENST00000636663 812 ntBASIC20.47■□□□□ 0.87
EFNB3Q15768 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EFNB3Q15768 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EFNB3Q15768 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
EFNB3Q15768 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
EFNB3Q15768 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFNB3Q15768 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.46■□□□□ 0.87
EFNB3Q15768 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFNB3Q15768 AC022616.5-201ENST00000518796 181 ntBASIC20.46■□□□□ 0.87
EFNB3Q15768 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFNB3Q15768 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.46■□□□□ 0.87
EFNB3Q15768 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
EFNB3Q15768 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
EFNB3Q15768 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
EFNB3Q15768 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
EFNB3Q15768 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EFNB3Q15768 AC103724.3-201ENST00000564481 992 ntBASIC20.45■□□□□ 0.86
EFNB3Q15768 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.45■□□□□ 0.86
EFNB3Q15768 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
EFNB3Q15768 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EFNB3Q15768 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
EFNB3Q15768 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EFNB3Q15768 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
EFNB3Q15768 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
EFNB3Q15768 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.44■□□□□ 0.86
EFNB3Q15768 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EFNB3Q15768 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EFNB3Q15768 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EFNB3Q15768 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.43■□□□□ 0.86
EFNB3Q15768 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
EFNB3Q15768 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EFNB3Q15768 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms