Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.05■□□□□ 0.96
ATF1P18846 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
ATF1P18846 MIR219A2-201ENST00000608502 1504 ntBASIC21.04■□□□□ 0.96
ATF1P18846 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATF1P18846 AC148477.6-201ENST00000623746 465 ntBASIC21.04■□□□□ 0.96
ATF1P18846 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATF1P18846 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATF1P18846 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATF1P18846 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ATF1P18846 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATF1P18846 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.02■□□□□ 0.96
ATF1P18846 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ATF1P18846 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.02■□□□□ 0.96
ATF1P18846 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ATF1P18846 AC133561.1-201ENST00000568600 2415 ntBASIC21.02■□□□□ 0.95
ATF1P18846 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATF1P18846 AC096887.2-201ENST00000623443 1957 ntBASIC21.01■□□□□ 0.95
ATF1P18846 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATF1P18846 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATF1P18846 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATF1P18846 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATF1P18846 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATF1P18846 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.01■□□□□ 0.95
ATF1P18846 ZNRF2P2-203ENST00000454624 420 ntBASIC21.01■□□□□ 0.95
ATF1P18846 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.01■□□□□ 0.95
ATF1P18846 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATF1P18846 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATF1P18846 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATF1P18846 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATF1P18846 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21■□□□□ 0.95
ATF1P18846 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
ATF1P18846 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATF1P18846 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATF1P18846 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ATF1P18846 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATF1P18846 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATF1P18846 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.99■□□□□ 0.95
ATF1P18846 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.99■□□□□ 0.95
ATF1P18846 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
ATF1P18846 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATF1P18846 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATF1P18846 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATF1P18846 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATF1P18846 HLA-V-202ENST00000446817 847 ntBASIC20.98■□□□□ 0.95
ATF1P18846 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATF1P18846 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF1P18846 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF1P18846 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.97■□□□□ 0.95
ATF1P18846 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATF1P18846 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.97■□□□□ 0.95
ATF1P18846 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.96■□□□□ 0.95
ATF1P18846 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATF1P18846 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ATF1P18846 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ATF1P18846 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.95■□□□□ 0.94
ATF1P18846 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.95■□□□□ 0.94
ATF1P18846 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF1P18846 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ATF1P18846 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.95■□□□□ 0.94
ATF1P18846 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATF1P18846 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.95■□□□□ 0.94
ATF1P18846 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF1P18846 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF1P18846 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF1P18846 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF1P18846 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF1P18846 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.95■□□□□ 0.94
ATF1P18846 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF1P18846 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ATF1P18846 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF1P18846 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF1P18846 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
ATF1P18846 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.94■□□□□ 0.94
ATF1P18846 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF1P18846 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATF1P18846 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF1P18846 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF1P18846 AL359258.2-201ENST00000564063 1566 ntBASIC20.93■□□□□ 0.94
ATF1P18846 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF1P18846 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF1P18846 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.93■□□□□ 0.94
ATF1P18846 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.93■□□□□ 0.94
ATF1P18846 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF1P18846 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF1P18846 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF1P18846 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
ATF1P18846 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF1P18846 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF1P18846 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.92■□□□□ 0.94
ATF1P18846 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF1P18846 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.92■□□□□ 0.94
ATF1P18846 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.92■□□□□ 0.94
ATF1P18846 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF1P18846 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF1P18846 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ATF1P18846 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ATF1P18846 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF1P18846 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
ATF1P18846 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATF1P18846 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms