Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
NEFMP07197 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.98■■■□□ 2.71
NEFMP07197 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
NEFMP07197 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
NEFMP07197 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
NEFMP07197 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.97■■■□□ 2.71
NEFMP07197 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
NEFMP07197 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NEFMP07197 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
NEFMP07197 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NEFMP07197 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
NEFMP07197 KRT18P10-201ENST00000388836 1287 ntBASIC31.96■■■□□ 2.71
NEFMP07197 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
NEFMP07197 BHLHE23-202ENST00000612929 1109 ntBASIC31.96■■■□□ 2.71
NEFMP07197 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NEFMP07197 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
NEFMP07197 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
NEFMP07197 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
NEFMP07197 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.95■■■□□ 2.71
NEFMP07197 AC139795.1-202ENST00000500444 432 ntBASIC31.95■■■□□ 2.71
NEFMP07197 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.95■■■□□ 2.71
NEFMP07197 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.95■■■□□ 2.71
NEFMP07197 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.7
NEFMP07197 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
NEFMP07197 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NEFMP07197 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.94■■■□□ 2.7
NEFMP07197 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.94■■■□□ 2.7
NEFMP07197 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NEFMP07197 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
NEFMP07197 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NEFMP07197 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.93■■■□□ 2.7
NEFMP07197 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
NEFMP07197 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.92■■■□□ 2.7
NEFMP07197 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.92■■■□□ 2.7
NEFMP07197 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.92■■■□□ 2.7
NEFMP07197 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NEFMP07197 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NEFMP07197 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NEFMP07197 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NEFMP07197 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NEFMP07197 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.9■■■□□ 2.7
NEFMP07197 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.9■■■□□ 2.7
NEFMP07197 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.9■■■□□ 2.7
NEFMP07197 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NEFMP07197 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NEFMP07197 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NEFMP07197 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NEFMP07197 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NEFMP07197 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NEFMP07197 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.89■■■□□ 2.7
NEFMP07197 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
NEFMP07197 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
NEFMP07197 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NEFMP07197 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.88■■■□□ 2.69
NEFMP07197 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.88■■■□□ 2.69
NEFMP07197 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NEFMP07197 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
NEFMP07197 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.88■■■□□ 2.69
NEFMP07197 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NEFMP07197 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.87■■■□□ 2.69
NEFMP07197 AC074183.2-201ENST00000623112 922 ntBASIC31.87■■■□□ 2.69
NEFMP07197 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.86■■■□□ 2.69
NEFMP07197 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
NEFMP07197 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
NEFMP07197 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
NEFMP07197 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.85■■■□□ 2.69
NEFMP07197 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NEFMP07197 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NEFMP07197 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.85■■■□□ 2.69
NEFMP07197 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.85■■■□□ 2.69
NEFMP07197 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
NEFMP07197 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NEFMP07197 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NEFMP07197 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NEFMP07197 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
NEFMP07197 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
NEFMP07197 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NEFMP07197 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.84■■■□□ 2.69
NEFMP07197 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NEFMP07197 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NEFMP07197 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NEFMP07197 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.83■■■□□ 2.69
NEFMP07197 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.83■■■□□ 2.69
NEFMP07197 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.82■■■□□ 2.68
NEFMP07197 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NEFMP07197 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NEFMP07197 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
NEFMP07197 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC31.8■■■□□ 2.68
NEFMP07197 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.8■■■□□ 2.68
NEFMP07197 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
NEFMP07197 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NEFMP07197 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
NEFMP07197 RPS2P7-201ENST00000447334 885 ntBASIC31.79■■■□□ 2.68
NEFMP07197 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.79■■■□□ 2.68
NEFMP07197 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
NEFMP07197 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NEFMP07197 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC31.79■■■□□ 2.68
NEFMP07197 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.78■■■□□ 2.68
NEFMP07197 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NEFMP07197 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms